Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1963 ATGTTTGATGTTGAGAGAGAGCAGGACACAAGAATCAGTATCTGCTGTGCCACAAAGCCAGGATTGTTACTGTCAACAGTGAACACATTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGTTCAAAACAAAAAGCACTTCACCTTCCAAAATTACAATCATCAAAAGGCAACAAACACAATTCACACTAAACTGCTTTAATGGAAGCATGACAAGAACATGCCAAAAGGATCATCATCCAATTCAAGCATTTCATCAAGATCAAGATCCATCATCATCTACATCAACATGTCCAGAGCACTTTAGATGGATTCATGAAGATTTGGAACCATGGAAGAGTACAGGAATCACAAGGGAAACGGTGGAAAGTGGAAAAAATATTTCACAGCTTAGAATTGTGATTAAAAAAGGAAAAGCTTATGTAGAAACATATGCAGATTCATTTCAAACAAGGGATTTGTTCACTGTATGGGGAATAGTACAACTTTTAAGGTTGTACCCTGGGAGAGTACCAGATTTGGAGCTATTGTTTGAGACTGGTGATAGAACTGTATTGGATAAAAAAAGATTTCAAGGATCACAATCTGTGACACTACCACCTATTTTTAGTTATTGTGGACAAAATGATGCTCTTGATATTGTCTTTCCTGATTGGTCCTTTTGGGGTTGGGCTGAGACTGGAATAAAACCATGGGAGAAAGTGTTGAAGGATATACAAGAAAGCAACAAGAAGATCACATGGAAGGATAGGATTCCCTATGCTTTTTGGAAAGGAAACACACATGTGTCCTCACAAAGGTATAAGCTTAGGCAGTGTAATGTCACAGACCAGCATGATTGGAATGCTCGTATATATTCAGTGCACTGGAATAAGGAAATTGAACATGGGTTCAATAGCACAAAACTAGAAGATCAATGTACACACAGGTACAAGATTTACGTGGAAGGGAGATCATGGTCTGTGAGTGAAAAATATATAATAGCATGTGACTCAATGACATTGTTCATAAAGCCAAGATATTATGATTTCTTTACAAGAAGCCTAGTACCTTATAAGCACTACTGGCCCATCAACAAGCAAAACATGTGTCAAGATATTAAGTATGCTGTTGATTGGGGCAATACTCATCCAGGGAAGGCAGAAGAGATTGGCAGAGAAGGGACAAGATTCATAGAAGAGAACGTAAATATGAAATTGGTGTATGATTATATGTTACATCTATTGACTGAATATGCAAAGCTCATGAGATTTGAAGCAACCATACCTGCAGGAGCAGTTGAGGTTTGTTCTGAAAACTTGGCATGTCCAATGGGTGGTATATGGAGGGAGTTTATGGTTGAGTCCATGGTTAAGTCACCAAGTGATACACTTCCATGTACTATGTTTTCTCCTTATTTATGA 1449 0.3803 MFDVEREQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQASCSEFKTKSTSPSKITIIKRQQTQFTLNCFNGSMTRTCQKDHHPIQAFHQDQDPSSSTSTCPEHFRWIHEDLEPWKSTGITRETVESGKNISQLRIVIKKGKAYVETYADSFQTRDLFTVWGIVQLLRLYPGRVPDLELLFETGDRTVLDKKRFQGSQSVTLPPIFSYCGQNDALDIVFPDWSFWGWAETGIKPWEKVLKDIQESNKKITWKDRIPYAFWKGNTHVSSQRYKLRQCNVTDQHDWNARIYSVHWNKEIEHGFNSTKLEDQCTHRYKIYVEGRSWSVSEKYIIACDSMTLFIKPRYYDFFTRSLVPYKHYWPINKQNMCQDIKYAVDWGNTHPGKAEEIGREGTRFIEENVNMKLVYDYMLHLLTEYAKLMRFEATIPAGAVEVCSENLACPMGGIWREFMVESMVKSPSDTLPCTMFSPYL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1963 482 Pfam Glycosyl transferase family 90 109 481 IPR006598 -
Mtr7g1963 482 PANTHER GLYCOSYLTRANSFERASE FAMILY 90 PROTEIN 57 481 - -
Mtr7g1963 482 SMART cap10 185 434 IPR006598 -
Mtr7g1963 482 CDD ACT_UUR-ACR-like 10 51 - -
Mtr7g1963 482 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 57 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1963 Mtr-Chr7 35711755 35722382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1963 2 56 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 71.429 1.89e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1963 - - mtr:MTR_7g076860 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1963 7 35711755 35722382 Mtr6g1420 6 22613531 22622090 ECH
Mtr7g1963 7 35711755 35722382 Mtr7g1963 7 35711755 35722382 ECH