Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1958 ATGGGAAGGACACCTTGTTGTGATAAGAAGGGTTTGAAGAAAGGACCTTGGACTGCTGAAGAGGATGAAATTCTTGCTAACTATATTAAGAAGAATGGTGGTCATGGAAGCTGGCGTTCTCTTCCCAAGATCACAGGTCTTCTTCGTTGTGGTAAGAGTTGTAGGCTTAGGTGGACCAACTATCTAAGACCTGACATTAAACGTGGACCCTTTACTCCTGAGGAAGAAAAATTAGTCATTCAGCTTCATGCTATCCTTGGAAATAGGTGGGCTGCTATTGCATCCCAGTTACCCGGAAGAACAGACAATGAGATAAAGAACTTTTGGAACACACATTTGAAGAAACGTCTCAAAAGCTTGGGAATTGATCCAAAAACACACGAGCCAGTAGCCTCATTAACTAGTTACCCAAATCACAAGTCACATGCATCGGTTTCAACACGTCACATGGCTCAATGGGAGAGTGCAAGGCTTGAAGCAGAAGCAAGACTCTCAATTGAGTCATCACACTTCAACAACAATCCTAATTCCTTCACAAAAACTGATTCTTCTTCTGATTATTTCCTCCGTATATGGAACTCTGAAGTTGGAGATGCATTTCGCAAGGTTCAAAAACCAGATACAGATCATATTAACATAATCACTAGTTGCTCTCAGAGTCCTATTTCTGCAGGATCATTATCTTCCAACAAATGTGACTCCATTTCTGCTGTTACAGCAAGCAATAGTATTGTGAAAGAAGAGTTGGATTGGAGGAACTACAAGTTTAGTGCTGAAGATGTGCTTCTTGAGTCTGATTCATCAAGCTCCAATGACTTGCAAGATTCATCAGACACTGCTTTGCAGCTCTTGTTTGATTTTCCTATGAACAATGACATGAGTTTCTTAGGAAACTCTTTTGCTTCTCCTTTTTAG 915 0.4066 MGRTPCCDKKGLKKGPWTAEEDEILANYIKKNGGHGSWRSLPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHAILGNRWAAIASQLPGRTDNEIKNFWNTHLKKRLKSLGIDPKTHEPVASLTSYPNHKSHASVSTRHMAQWESARLEAEARLSIESSHFNNNPNSFTKTDSSSDYFLRIWNSEVGDAFRKVQKPDTDHINIITSCSQSPISAGSLSSNKCDSISAVTASNSIVKEELDWRNYKFSAEDVLLESDSSSSNDLQDSSDTALQLLFDFPMNNDMSFLGNSFASPF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1958 304 Gene3D - 70 143 - -
Mtr7g1958 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mtr7g1958 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 300 - -
Mtr7g1958 304 PANTHER PROTEIN ODORANT1-LIKE 1 300 - -
Mtr7g1958 304 SMART sant 67 115 IPR001005 -
Mtr7g1958 304 SMART sant 13 64 IPR001005 -
Mtr7g1958 304 CDD SANT 16 62 IPR001005 -
Mtr7g1958 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mtr7g1958 304 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mtr7g1958 304 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mtr7g1958 304 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mtr7g1958 304 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mtr7g1958 304 CDD SANT 70 113 IPR001005 -
Mtr7g1958 304 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mtr7g1958 304 Gene3D - 11 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1958 Mtr-Chr7 35646524 35650195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1958 1 296 MYB Transcription Factor Family AT3G61250 60.000 2.66e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g1958 Myb_DNA-binding 8.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1958 K09422 - gmx:100816569 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1958 7 35646524 35650195 Mtr7g1958 7 35646524 35650195 ECH
Mtr7g1958 7 35646524 35650195 Mtr8g0963 8 11788892 11792034 PCT