Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1953 ATGAATATTGATATAGGTTGTAGTTTGCCACAGTCAAGAGTTTTACACGGAGGCGCGGGGACTAGTTACGGACAAAAATATGTAGGTCAAGCAGGTTGTTTCGACTTTAGAAGGAGAGGTTTTGGTTGTGGTTTACTGGGTAAAAGTGTTTTGAGGTCGCGTTTTAGTGTGGAGAACAAAGTTAGTTGTATTTCTGCTTTGAATGATTCTGGTGATGAGTTTAAAGTTTTGAACAAGAAGAGAAGCGTGTCATCTAAGAATGAGAAACTTCTTATGGGATCTAGAAAGATTTGGTTGAAGTGTCAGGGTAGTGATTCTTTAGCTTATGTTAATGGAAATGGTCGCAATGTTGATTATGTGGAAGGTTCGGGTGAGGATTTAGGGGTGGTACCTGTAGCTGGTGTTGAATTGGATGTTTCAGGGGAAGAAGGAGGGAAGGTTGAGAGGGAAATAGGAGTAGAGGAAAAAAATGTTGATGAGTTGAAAGAACTATTGCAAAAGGCCGTGAAAGAGCTTGAGGTAGCGCAAATAAATAGTACTATGTTTGAAGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTTTTTGCATGATGAAGCAGCCCGATCTTTGGATGATGTTAATTCTACCCTTGACAGCATTCAAAAAGTTGCAAATGAAGAACATATCGCTAAAGATGCTGTCCAAAATGCTACAATGGCTCTTTCATTGGCCGAGGCAAAACTTCAGGTAGCTATAGAGTCTTTAGAGGCCGTGAAAGAAGTGCATGAAAGTTCTAATGAGAGTGATGGCGATAAGGACTTGACAGAAAAGGAGAGCACGCTTTTTGTTGCGCAAGAAGATATAAAGAAATGTCAGGATAATTTGACAAATTGTGAGGTAGAGTTGAGGCGCTTGCAAAATAAAAAGGAGGAGCTGCAAAAGGAAGTTAGCAAATTGCAAGAAATTTCTGAAAAGGCACAACTGGATGCAGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTCTTAGCGGAGCAAGCTGTTGCGTTTGAACTTGAGGCTACACAACGTGTGAACGATGCTGAGATTGCTTTACAGCGAGCTGATAAGTCTTTTCAAAATTTGAATGCTGAGGCTGTAGAAACTATACAAGTAGAAGATGTCGTTCTTGTTTCTGAGGAGAACATGGTAGAAAGTTTTTCTGATGATGTCACAGTTGGTAGTGACAAAGATTTGGCCACAAGCGATGATGCATCTTTGCCTGCCAAGTTACCACCTGAAACACAATCTGAAAAAACCGGCCAAATTTTGGAAGAACCAACACAGTTGGATTATATAAGTGATAATGAGAATGGCGTCCAAACAAAAAAGCAGGAAACACAAAAAGATTTTACTAAAGATAGTTCACCATTAGCTCCCAAAGCATTATTGAAGAAGTCATCTCGATTCTTTCCGGCATCGTTCTTTTCTTTTCCTGAAGAGGAGGCTGAGTCCACACCAACATCGGTTTTCCAGGGCCTCATACTATCTGCGAAAAAGCAGTTTCCCAAGCTAGTTCTTGGATTATTGTTAATGGGAGCAGGAGCTGCTGTCTATGCCAGTAGAGCAGACAAAAATGCTCAGCTCCTTCAACCGGCAGATGTCATTATGACCAGTGCTGAAGAACTTTCTTCTAATGCAAAGCCTCTCTTTAGAAAACTCCAGAAAATCCCCAAGAAAATTAAGAAGATTATTGCGTCGTTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGTAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTTTCTCCATCATTCGTAACGTTCATGCGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTATTTAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCTATGAAGAAATATGTTTTCGGATTAGGTTCTGCGCAGGTTTTGGCAACTGCTGGAGTTATTGGCTTGGTGGCTCATTATATCTGTGGCCTACCTGGCCCTGCTGCTATAGTTATCGGGAATGGCCTGGCTTTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAAAGAGGCGAGAGCACATCACGGCATGGACGAGCTACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTCGTAGTCTTACTAATTCTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATTACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGGCCAATATACAAGCAAGTCGCAGAAAATCAAAATGCTGAAATATTCTCAGCCAATACACTTCTTGTTATTCTTGGGACCAGTCTTTTGACTGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTAGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCGTCACGGGGACATTGGCACTCTTAATATGCGGCAAGACTCTCTTAGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCGTCATTTCTGCTTTAAGAGCTGGACTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGAGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTATCTTCTTTGTTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACTCCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTCGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCCGAGCGACTTATTCCATTTGTTGCACTAGATGTGAGAAGTGAAAGAGTGGCAGTTGGGCGAGCACTCGATCTCCCTGTGTACTTTGGAGATGCTGGCAGTCGAGAGGTCCTTCATAAGATCGGGGCTGAAAGGGCATGTGCTGCAGCTATTACTCTAGATACGCCTGGAGCAAATTATAGAACAGTTTGGGCTCTGAGTAAGTACTTCCCAAATGTGAAGACTTTTGTTCGCGCCCATGACGTTGATCATGGAGTGAATTTAGAGAAGGCTGGAGCTACTGCGGTGGTCCCAGAGACCTTGGAGCCAAGTCTTCAATTAGCAGCTGCTGTGCTTGCTCAGGCTAAACTTCCGGCATCAGAGATTTCAGCTACTATAAATGAATTCAGATGCCGACATCTAGCTGAGCTTTCAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTACAAGAATTATGAGCAAAACCAAATCTCAATCTCCAGATGCATTAGATTTAGATGATGCCCAAGTCTCTGAAGGGACACTGGCAGTATGA 3582 0.4238 MNIDIGCSLPQSRVLHGGAGTSYGQKYVGQAGCFDFRRRGFGCGLLGKSVLRSRFSVENKVSCISALNDSGDEFKVLNKKRSVSSKNEKLLMGSRKIWLKCQGSDSLAYVNGNGRNVDYVEGSGEDLGVVPVAGVELDVSGEEGGKVEREIGVEEKNVDELKELLQKAVKELEVAQINSTMFEEKVKKISETAIFLHDEAARSLDDVNSTLDSIQKVANEEHIAKDAVQNATMALSLAEAKLQVAIESLEAVKEVHESSNESDGDKDLTEKESTLFVAQEDIKKCQDNLTNCEVELRRLQNKKEELQKEVSKLQEISEKAQLDAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADKSFQNLNAEAVETIQVEDVVLVSEENMVESFSDDVTVGSDKDLATSDDASLPAKLPPETQSEKTGQILEEPTQLDYISDNENGVQTKKQETQKDFTKDSSPLAPKALLKKSSRFFPASFFSFPEEEAESTPTSVFQGLILSAKKQFPKLVLGLLLMGAGAAVYASRADKNAQLLQPADVIMTSAEELSSNAKPLFRKLQKIPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGFSIIRNVHATKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAGVIGLVAHYICGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVVTGTLALLICGKTLLVSLMGRIFGISVISALRAGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSERVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGVNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEISATINEFRCRHLAELSELCEASGSSLGYGFTRIMSKTKSQSPDALDLDDAQVSEGTLAV* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1953 1193 ProSiteProfiles RCK N-terminal domain profile. 995 1117 IPR003148 GO:0006813
Mtr7g1953 1193 Gene3D - 583 971 IPR038770 -
Mtr7g1953 1193 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 594 874 IPR004771 GO:0006812|GO:0008324|GO:0016021
Mtr7g1953 1193 Pfam Sodium/hydrogen exchanger family 593 963 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr7g1953 1193 MobiDBLite consensus disorder prediction 395 463 - -
Mtr7g1953 1193 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 992 1131 IPR036291 -
Mtr7g1953 1193 Coils Coil 151 178 - -
Mtr7g1953 1193 Gene3D - 991 1155 - -
Mtr7g1953 1193 Coils Coil 282 330 - -
Mtr7g1953 1193 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 4 1193 - -
Mtr7g1953 1193 MobiDBLite consensus disorder prediction 420 448 - -
Mtr7g1953 1193 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 4 1193 - -
Mtr7g1953 1193 Pfam TrkA-N domain 996 1109 IPR003148 GO:0006813
Mtr7g1953 1193 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1953 Mtr-Chr7 35607903 35625126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1953 3 1193 Inorganic Solute Cotransporters AT4G00630 66.092 0.0 1401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1953 - - gmx:100798822 1720.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1953 7 35607903 35625126 Mtr7g1953 7 35607903 35625126 ECH
Mtr7g1953 7 35607903 35625126 Mtr8g0977 8 11915430 11925067 PCT