Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1932 ATGGGTGTTGGTGGTAATTTCTGGGAGTTGTTGAAGCCCTATTCACGCAATGAAGGTTTTGATTTCTTGAGAAACAAGCGAGTTGCTATTGATTTATCGTTTTGGATTGTTCAGCATAACAATGCTATCAAAACCCATGTCAAGAAACCTCACCTCAGACTCACTTTTTTTCGGACGATTAATCTCTTTTCTAAGTTTGGAGCGTTTCCGGTGTTCGTTGTTGATGGGACTCCGTCGCCGTTGAAATCACAGGCCAGGATTGCTAGATTTTTCCGGTCTTCTGGAATTGAGTCGACTAGCTTGCCGGTTGCTGAAGAAGGTGTTTCAGCTGGGAGGAACAGTACATTTTCAAGATGTGTTCAAGAGTGTGTGGAACTTGCTAAGCTACTTGGGATTCCTGTACTGAAGGCTAAAGGAGAAGCTGAGGCACTCTGTGCCCAATTAAATAGTGAAGGTCATGTAGATGCATGCATCACACCTGACAGTGATGCATTCCTCTTTGGGGCGAAATGCATTATAAAATCATTCTCTCCCAACTCAAAAGAACCTTTTGAATGCTACAATATGTCAGATATTGAAGCTGGGCTTGGATTGAAGAGGAAACACCTAATAGCTATCTCTCTTTTGGTTGGAAATGATCATGATTTGAGTGGTGTTCAAGGGATCGGAATTGATAGTGCTCTTCGTTTTGTTCAAGCTTTTGGTGAAGATGATATATTGAATAGATTACATGAGATAGGCAAAGGGAATGCTTTTCAAGTTCCTATCGACATTAAAGCTGAGGAAAATATGGATATTGATGGGAACTCCCCAAATACAAAACAAACTCACTGCTCATTCTGTGGGCATCCAGGCAACAAAAGAGATCATATGAAGTTTTCATGTGAATTTTGTGTCGCGGATGACAATGAAGGTTGCTTGAAAAAACCAGAGGGTTTTAAATGTGATTGCAACTCTTGTTGTATGAATAGGAAACATAAGGAGCAGAAAAAGATGGAAAATTGGCACACAAAAATCTGTGACAAGATTGCAAAGGAGCCAAATTTTCCAAAGGATGAAATCATTGATATGTATCTATGCAATGACAATGGTTACTTTTCCGCGAATGATGGACCTCAGATCTCATGGGAAAGACCGAATATGGACCTTCTGGTTGATTTTTTAAACTTCCATCAGAACTGGGATCCGTCATACATTCGGCGGATTATGTTTCCTATGATGTCAACCATCTTCTTGAGAGAAATGGCTACAACTCCAACCGATAGTTTGCTATTTGGGCAGTTTGAGTTTGCTTCTTTAAAACGTGTGAAGACGAGATACGGATATCAGTTTTACGTTGTCAAGTGGAAACGTGCAATGGGAAATATTGCCTCTAAAACTCCAGCAAATAAATCTGGCATGCAAGAAGATGTTATAGAGCTTGATGTTGATGAAACAGTGGATCTACTAGACGATTGCGATTTTCCCCAGATTTGTGAAGAAGATGGATGTAGTTTTCTCTTGACAGATGAAAATATGGACCTTGTTGGGGCTGCTTACCCAGAAGAAGTGAAAAGGTTCCGGCAGGAACAGGAATTGAAGGACGTGAAACGAAAAAAGAATCCGACCTCAATATCTCAAGAAAACGAAAAGTCCTCAACATCACCAAACTCAAAAGGTGTCCAGCTAAATATTACAGAGTTCTTCCCAACAACCAAAAGTAAACATAATCCAAAACATGGAGAAGAGTCATCATCCAATAAAAATGACAACCAAGACAGCGGAGGCTCAAAACCAAAGAGGAAATCGTCAAGTCCTAATATTCCAAAATCTGTTAGGCGTCGCCTTTTGTTTGACTAG 1839 0.4024 MGVGGNFWELLKPYSRNEGFDFLRNKRVAIDLSFWIVQHNNAIKTHVKKPHLRLTFFRTINLFSKFGAFPVFVVDGTPSPLKSQARIARFFRSSGIESTSLPVAEEGVSAGRNSTFSRCVQECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCIIKSFSPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQAFGEDDILNRLHEIGKGNAFQVPIDIKAEENMDIDGNSPNTKQTHCSFCGHPGNKRDHMKFSCEFCVADDNEGCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLREMATTPTDSLLFGQFEFASLKRVKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIELDVDETVDLLDDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKDVKRKKNPTSISQENEKSSTSPNSKGVQLNITEFFPTTKSKHNPKHGEESSSNKNDNQDSGGSKPKRKSSSPNIPKSVRRRLLFD* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1932 612 MobiDBLite consensus disorder prediction 581 603 - -
Mtr7g1932 612 Gene3D - 198 264 - -
Mtr7g1932 612 SMART xpgineu 128 198 IPR006086 GO:0004518
Mtr7g1932 612 CDD PIN_GEN1 2 202 - -
Mtr7g1932 612 MobiDBLite consensus disorder prediction 523 538 - -
Mtr7g1932 612 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Mtr7g1932 612 MobiDBLite consensus disorder prediction 523 612 - -
Mtr7g1932 612 Pfam XPG N-terminal domain 1 89 IPR006085 GO:0004518
Mtr7g1932 612 MobiDBLite consensus disorder prediction 566 580 - -
Mtr7g1932 612 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Mtr7g1932 612 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Mtr7g1932 612 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Mtr7g1932 612 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Mtr7g1932 612 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Mtr7g1932 612 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Mtr7g1932 612 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 599 IPR006084 -
Mtr7g1932 612 Gene3D - 3 197 - -
Mtr7g1932 612 PANTHER FLAP ENDONUCLEASE GEN-LIKE 1 1 599 - -
Mtr7g1932 612 MobiDBLite consensus disorder prediction 539 565 - -
Mtr7g1932 612 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 414 IPR036279 -
Mtr7g1932 612 SMART xpgn3 1 96 IPR006085 GO:0004518
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1932 16 359 Core DNA Replication Machinery Family AT5G26680 24.282 7.04e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1932 K15338 - gmx:100791251 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1932 7 35407519 35412584 Mtr7g1932 7 35407519 35412584 ECH