Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1927 ATGGTGGAAGATGGTGTTGCAGTTGATATACTTTCAACAGAAGATTGGTTGTTACATGCAAAGGAACTTGTTCCTATTGCTCTTGATAAAGCAAAAGAGGTTAAAGGGTTTTCTACTAGATGGAAAATGATCATTTCTAGATTAGAACAGGTTCCATCAATGTTATCAAACTTATCAAGTCATCCATGTTTCTCAAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTCTGTCGAAGTCGCTTGAAGGCACGATCGAATCAGCTGAATTGTGTGTGAAGGAGAAGTATGAAGGTAAACTTCATATGCAGAGTGATCTGGATGCATTAATCGGGAAAATGGATTTGAATTTACGAGATTGTGGACTTTTGATCAAAACTGGTATGCTTGGTGAGGCTACTTTGCCGTTAAATGCGTCTTCTGTGTCAGGTTCTGCAACAGAATCTGATGCAGCAATCCACAACAACATAAGGGAGCTACTTGCGCGCCTTCAGATCGGTCACTTAGAAGCGAAGCACAAAGCTTTGGACAGTGTTGTTGAGGTTATGAAAGAAGATGAAAAGAATGTTTTGGCTGTTTTTAGCAGGAGCAACATTGCTGCACTGGTTCAATTACTTACAGCAACATCAACAAGGATAAGAGAGAAAACAGTTACTGTCATATGCTCGCTAGCTGAATCGGGTAGCTGCGAGGATTGGCTAGTTTCTGAAGGTGTTCTTCCACCTCTTATAAGACTTGTTGAATCAGGAAGTGCTGTAGGTAAAGAAAAGGCTGCAATATCTTTACAAAGGTTATCAATGTCGGCTGAAACATCGCGTGAAATCGTAGGACATGGTGGCGTTTGCCCGTTGGTTGAGCTTTGTCGAACCGGCGATTCTGTTTCGCAGGCTGCAGCAGCTTGTACATTGAAGAATATTTCAGCTGTTCCTGAGGTGAGACAAGTTTTGGCTCAAGAAGGGATTGCGAGGGTTATGATCAATTTGTTAACTTGTGGAATGTTGTTAGGTTCCAAAGAATATGCAGCAGAATGTTTGCAGAATCTCACTGCAAGCAATGAGAGTCTAAAAAAAAGTGTTATATCGGAAGGTGGTGTTAGGAGTCTCTTAGCATATCTTGACGGTCCACTTCCTCAAGAATCTGCGGTCGCAGCGTTAAGGAATTTGGTAGGATCAGTTTCTGAGACAGCTTTGGTTTCGTTAGGATTACTTCCTCGTTTGGTTCACGTGTTGAAATCCGGCTCCCCGGGAGCACAAAATGCCGCTGCGTCAGCAATCTGCCGAGTTAGCAGCTCGACAGAAATGAAAAAATTGGTCGGCGAAGCCGGTTGCATTCCTCTCCTTGTTAAAATGCTTGAGGCTAAACAAAACAGTGCTAGAGAAATTTCTGCACAAGCATTAGCAAGCTTGTTAACTGTGTCACAAAATAGAAGAGAAACTAAGAAGGATGATAAAAGTGTGCCTAATTTGGTTCAGTTACTTGATCCTAGTCCTCAAAACAATGCAAAAAAATATGCAGTTACATGCCTTGGATTGATTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCATATGGTGCTATTGGATATTTGAAGAAACTTACTGAGATGGATACTCCAGGTGCTAAAAGGTTACATGAGAGATTGGAAAGAGGGAAATTAAGAAGTTTGTTTGGTAAGAAATAG 1683 0.4124 MVEDGVAVDILSTEDWLLHAKELVPIALDKAKEVKGFSTRWKMIISRLEQVPSMLSNLSSHPCFSKNALCKEQLQALSKSLEGTIESAELCVKEKYEGKLHMQSDLDALIGKMDLNLRDCGLLIKTGMLGEATLPLNASSVSGSATESDAAIHNNIRELLARLQIGHLEAKHKALDSVVEVMKEDEKNVLAVFSRSNIAALVQLLTATSTRIREKTVTVICSLAESGSCEDWLVSEGVLPPLIRLVESGSAVGKEKAAISLQRLSMSAETSREIVGHGGVCPLVELCRTGDSVSQAAAACTLKNISAVPEVRQVLAQEGIARVMINLLTCGMLLGSKEYAAECLQNLTASNESLKKSVISEGGVRSLLAYLDGPLPQESAVAALRNLVGSVSETALVSLGLLPRLVHVLKSGSPGAQNAAASAICRVSSSTEMKKLVGEAGCIPLLVKMLEAKQNSAREISAQALASLLTVSQNRRETKKDDKSVPNLVQLLDPSPQNNAKKYAVTCLGLISSSKKCKKLMISYGAIGYLKKLTEMDTPGAKRLHERLERGKLRSLFGKK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1927 560 Gene3D - 375 548 IPR011989 -
Mtr7g1927 560 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 4 560 - -
Mtr7g1927 560 SMART arm_5 390 429 IPR000225 GO:0005515
Mtr7g1927 560 SMART arm_5 472 513 IPR000225 GO:0005515
Mtr7g1927 560 SMART arm_5 430 470 IPR000225 GO:0005515
Mtr7g1927 560 SMART arm_5 185 225 IPR000225 GO:0005515
Mtr7g1927 560 SMART arm_5 267 307 IPR000225 GO:0005515
Mtr7g1927 560 SMART arm_5 308 349 IPR000225 GO:0005515
Mtr7g1927 560 SMART arm_5 350 389 IPR000225 GO:0005515
Mtr7g1927 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 560 - -
Mtr7g1927 560 SUPERFAMILY ARM repeat 155 539 IPR016024 -
Mtr7g1927 560 Gene3D - 146 374 IPR011989 -
Mtr7g1927 560 Pfam Armadillo/beta-catenin-like repeat 272 307 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1927 Mtr-Chr7 35368578 35372020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1927 242 542 U-box Gene Family AT2G23140 22.848 9.08e-08 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1927 7 35368578 35372020 Mtr7g1927 7 35368578 35372020 ECH