Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1921 ATGCCTTCTAGTGCAATCTCACAACCTCGTTTATCAACTCCTACTTTGGTTAAATCCATGTTCAACTCATCTGGTCTATCTTTAGCACTTCAAACAAATTTAGAAGCACAAGGTGGTGATATGAAGAGATTAATGGCTGAGAATTTTCATCAAACAAATAATGGTTTGAGAAGGAATAGAGAAGAAGAAGAACATGAAAGCTGCAGATCTGGTAGTGATAACATGGATGGTATTTCTGGTGATGATTTTGATGCTGCCGACAATCCGCCAAGAAAAAAGCGTTATCACCGACATACTCCTCAACAAATTCAAGAACTTGAATCGATGTTTAAAGAGTGTCCTCATCCTGATGAAAAACAAAGACTTGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTCAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGTCACGAGAATTCGCTACTTAGGCAAGCAAATGATAAACTAAGAGCTGAGAACATGTCAATAAGAGAAGCAATGAGGAATCCCATGTGTTCAAATTGTGGAGGACCAGCAATTATTAGTGAAATTTCACTTGAAGAACAACATCTAAGAATTGAGAATGCAAGACTAAAAGATGAATTAGACCGAGTTTGTACACTCGCCGGCAAGTTTTTAGGCCGTCCAATTACGTCGTTACCAAACTCGAGTTTAGAAATTGGTTTTGTTGGTTTGAACAATACTTTGCCTTCAACAATGCCTTTAGGTCAAGATTTTGGTATGGTGTCAATGTCACCACCTTCAATTACAAGAGGAACAAGTATGGTAACAAATACTAATAGTAATGGTTTTGATAGATCAATGGAGAGGTCTATGTTCCTTGAACTTGCTTTGGCTGCAATGGATGAGTTGGTGAAGATGGCACAAACAAATGAACCTCTTTGGATTAGAAGTGTTGAAAGTGGAAAAGAAATTTTTAATCATGAGGAATATACAAGGATTATTAGTACTCCTTGTATTGGTTTGAAACCAAATGGTTTTGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGATTCAAATCGATGGTCAGAGATGTTCCCTTGTGTGATTGCAAGAAGCTCCACAACTGAAGTGATATCTAGTGGAATAAATGGAACCAGAAATGGTGCTCTACAACTGATGCAAGCTGAACTTCAAGTGCTTTCTCCATTGGTTCCTGTTCGTGAGGTGAGTTTTCTAAGGTTTTGCAAGCAACATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCCATAGATACCATCAGAGAAACTTCAGCTGGTGCACCCACTTTTCTTACCTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGAAGAAAGCCAAGTTCACCAGCTCTATAGACCCTTGCTAAGCTTAGGCATGGGTTTTGGCGCACAACGTTGGGTTGCAACCCTACAACGCCAATGCGAATGTCTAGCAATTTTAATGTCATCATCACTCCCCTCTAGAGAACACTCAGCAATAAGTGCGGGAGGAAGGCGTAGCATGCTAAAGCTAGCGCACCGAATGACAAACAATTTTTGTGCCGGAGTGTGTGCATCGACGGTGCACAAATGGAACAAATTGAATGCAGGGAACGTGGGCGAGGACGTTAGGGTAATGACAAGGAAAAGTGTGGATGATCCGGGTGAGCCACCAGGGATTGTGCTTAGTGCAGCAACCTCAGTTTGGCTACCCGCTTCACCACAAAAAGTATTTGATTTCCTCCGCAACGAGAAGCTTAGAAGTGAATGGGACATACTCTCCAACGGTGGTCCAATGCAAGAGATGGCTCACATTGCCAAAGGACATGACCATGGCAACTGTGTCTCCCTCCTACGAGCTAGTGCTATTAATTCAAGTCAAAGTAGCATGTTGATTTTACAAGAAACAAGCACAGACGCATCGGGGTCGCTTGTTGTGTACGCTCCGGTGGATATTCCTGCAATGCATGTAGTAATGAACGGTGGCGATTCAGCTTATGTTGCGCTTCTTCCGTCGGGTTTTGCCGTGTTACCAGATGGACATAGCAATGGGAGCGGTAATCACGAAGACGCATCACAGCCGAGAGTGAGTGGATCACTTTTGACGGTAGCATTTCAGATACTTGTGAATAGCCTTCCGACGGCAAAGCTCACGGTGGAATCAGTTGAAACGGTTAACAATCTCATTTCATGTACTATTCAAAAGATAAAAGTAGCACTTCAATGTGAGAGTTAA 2337 0.4193 MPSSAISQPRLSTPTLVKSMFNSSGLSLALQTNLEAQGGDMKRLMAENFHQTNNGLRRNREEEEHESCRSGSDNMDGISGDDFDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSNCGGPAIISEISLEEQHLRIENARLKDELDRVCTLAGKFLGRPITSLPNSSLEIGFVGLNNTLPSTMPLGQDFGMVSMSPPSITRGTSMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRSVESGKEIFNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIRETSAGAPTFLTCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQRQCECLAILMSSSLPSREHSAISAGGRRSMLKLAHRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPASPQKVFDFLRNEKLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAINSSQSSMLILQETSTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDGHSNGSGNHEDASQPRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTIQKIKVALQCES* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1921 778 ProSiteProfiles 'Homeobox' domain profile. 89 149 IPR001356 GO:0003677
Mtr7g1921 778 CDD homeodomain 91 149 IPR001356 GO:0003677
Mtr7g1921 778 Coils Coil 190 210 - -
Mtr7g1921 778 Pfam Homeodomain 92 147 IPR001356 GO:0003677
Mtr7g1921 778 ProSiteProfiles START domain profile. 282 520 IPR002913 GO:0008289
Mtr7g1921 778 SUPERFAMILY Bet v1-like 283 517 - -
Mtr7g1921 778 Coils Coil 158 178 - -
Mtr7g1921 778 MobiDBLite consensus disorder prediction 54 71 - -
Mtr7g1921 778 ProSitePatterns 'Homeobox' domain signature. 124 147 IPR017970 GO:0000981|GO:0006355
Mtr7g1921 778 CDD START_ArGLABRA2_like 286 516 - -
Mtr7g1921 778 SMART START_1 291 517 IPR002913 GO:0008289
Mtr7g1921 778 MobiDBLite consensus disorder prediction 51 99 - -
Mtr7g1921 778 SUPERFAMILY Bet v1-like 539 762 - -
Mtr7g1921 778 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 775 IPR042160 -
Mtr7g1921 778 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 50 775 - -
Mtr7g1921 778 Pfam START domain 291 517 IPR002913 GO:0008289
Mtr7g1921 778 SUPERFAMILY Homeodomain-like 75 149 IPR009057 -
Mtr7g1921 778 Coils Coil 46 66 - -
Mtr7g1921 778 Gene3D - 80 165 - -
Mtr7g1921 778 SMART HOX_1 90 153 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1921 Mtr-Chr7 35294585 35301916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1921 1 778 Homeobox Transcription Factor Family AT3G61150 65.087 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr7g1921 START 5.6e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1921 K09338 - gmx:100787537 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1921 7 35294585 35301916 Mtr7g1921 7 35294585 35301916 ECH
Mtr8g1027 8 12414014 12420721 Mtr7g1921 7 35294585 35301916 ECH