Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1907 ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAATGCTACAAGCAGACAAGTGACATTCTCAAAGAGGCGTAATGGTTTGTTGAAGAAAGCATTTGAGCTATCTGTTCTCTGTGATGCTGAAGTTGCTCTTATCATCTTCTCTCCAAGAGGAAAACTTTATGAATTTTCAAGCTCCTGCATGCAGGACACAATTGAACGCTACCGTAGGAATACCAGGAGTGCTCAACCAATGCAAAGATCAGATGAACAAAATATGCAGAATTTGAAGCATGAAACAGCAAGTTTGATGAAGAAAATTGAGCTTCTTGAAGCTTCGAAACGGAAACTCATGGGAGAAGGTTTGGGGTCATGCTCTTTGGATGAACTACAACAGATAGAACAGCAGTTGGAAAAGAGTGTTAGCGTTGTTCGAGCAAGAAAGAATCAGGCATACAAGCATCAAATTGACCAACTAAAAGAAAAGGAAAAAAACCTAGTTGCTGAAAATGCCAGGCTCTCTAAGCAGCCCCCGCAGCCGCAGCCGCAGCCAACAACAAAGGATCATCAAAGAGAAGATCAACAACCCTATGCTGAAAGCAGTCCAAGCTCAGATGTAGTGACTGAATTGTTCATTGGACTTCACAGGTCTAGTTGA 639 0.421 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSCMQDTIERYRRNTRSAQPMQRSDEQNMQNLKHETASLMKKIELLEASKRKLMGEGLGSCSLDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKNLVAENARLSKQPPQPQPQPTTKDHQREDQQPYAESSPSSDVVTELFIGLHRSS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1907 212 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mtr7g1907 212 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mtr7g1907 212 Gene3D - 14 96 IPR036879 GO:0003677|GO:0046983
Mtr7g1907 212 PANTHER MADS BOX PROTEIN 1 209 - -
Mtr7g1907 212 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mtr7g1907 212 Pfam K-box region 83 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mtr7g1907 212 MobiDBLite consensus disorder prediction 164 200 - -
Mtr7g1907 212 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Mtr7g1907 212 Coils Coil 87 107 - -
Mtr7g1907 212 Coils Coil 143 170 - -
Mtr7g1907 212 SUPERFAMILY SRF-like 3 78 IPR036879 GO:0003677|GO:0046983
Mtr7g1907 212 CDD MADS_MEF2_like 3 77 IPR033896 GO:0000977|GO:0045944
Mtr7g1907 212 PANTHER MADS-BOX PROTEIN SOC1 1 209 - -
Mtr7g1907 212 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mtr7g1907 212 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mtr7g1907 212 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mtr7g1907 212 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mtr7g1907 212 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1907 Mtr-Chr7 35183255 35202812 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1907 1 158 MADS-box Gene Family AT2G45660 75.316 5.16e-84 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mtr7g1907 K-box 1.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1907 - - gmx:100784678 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1907 7 35183255 35202812 Mtr7g1907 7 35183255 35202812 ECH
Mtr7g1907 7 35183255 35202812 Mtr8g1081 8 13227391 13241957 PCT