Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1884 ATGGCATCATCTCAAAAAAAACTTCACCGTTCAATCTTTCAACTTCCACCATACTTCTTCGACCATTGTCGTTTTCTCCCTTCCCCTCCCTCCCAAACCCTTCAACCACCTTCAAACCACATCGATCATATTCAAAACGCCGTCGTTTCGGGTTCTAGCTTAACATGCAATACTTGTAAGGCTCAGTTCGATTCTTTTCAAGATCAACGTTCTCATCTCAAATCCGATATTCATCGATTCAATGTGAAACTGACAATTGCTGGGAAAAATACCGTGAAGGAAGAGGATTTTGAGGATCTGACATCTGATTTTGTCGAAGACTGGGATGTGTCAAGTATTATTAGGAATGAGTCTCCAGGTCAAAGTGTTATCCGTGGTAAATCTGTTGAAAGCTGTAAACATAAGCTATTCGTCTGTCTTCAGACAGGGCAGAGAGTTTCTATCTGGAAGTGTTTGATAAGGAATGTGAGCGAAAATGTGTTGTATGATGATGATGTTGAGAGGTTGAAATCTCTGACCGTTGAGCCCAGGAATAACACCCGATTGAGGATTGTTCTGCTTGCATCCGGTGGGCACTTTGCTGGTTGTGTCTTTGATGGCGATACACTTGTGGCTCACAAGACATTTCATAGATATGTTGCGAGGGCCAAGGCTGGAAAAAAACAGTCATCTAAAGATGCTTTTGGCAAGACTGTACATTCTGCCGGTGATTCACTTCGTCTTCACATGGAACATTCACTAATGAAGGAAGTTCGCGAACTACTTACTGCTTGGAGACCTTATTTCGATGCTTCTGTTTGCATTTTTATGCACGCGCCTTCAAGTAGTCGTCAGCTGCTTTTTGATAGAGAAAAGCCATGTTTTACCAATTCACAATGTGTTAGAAATATTGCTATGATTGTCCGCAGGCCTACCCTCAGGGAAGCAAAACGTGTGTATGGCCAGTTGACACTAGTATCCTATGAAGCAGACGAGAAGGAAATTTTCCCGAGCAATAAACAAGACGTAGTGCCAACTCTCATTGACACGCCTCCTGCTAGCAAAGTGGACATGGCTAGGTTGGATATAAACGCTAAAGCTGAAGCTTTTTCCAGTAACAAAAATGATGAACATCTTGCTTCAAGTAAAGTCAAAATTGAGAGTGAGTTTACTATCAACTCAACTCCTTTACATCAAGCGGCACAATCTGGTGATGCTGTAAAGGTTATGGAACTCTTGGAACAGGGCATGGATCCATGCATTAAAGATGATAGGGGTCGAACCCCATATATGTTGGCACCTCGCAAGCAAATCAAGAAAACTTTCAGAAGGTTTATGGCTTCAAATCTCGACAAATGGGATTGGAAAGCTGCACAAGTGTTTTGTCCATTGACCAAAGAAATGGAAAAATATCAAGCTGCTATGAAGGCAGAGAGAAGAGCTAAAGCAAAAGAATTGAAGAAAATACGTGAAGCAGAAGAAATTAAGGCTCAGGCTGAAGCTGCTGAAAAACAAGCGATTGCTCCAACATCTATTTTTTGGTGGTGGCCGGGGTCTCCAACATCTGCTACAGGACAATCTCAACCAAAAAGTGGTGCAAAATTATCGAAAGAGGAGGAAATAAAAAGGGCACAGGATGCAGAAAGAGAAAAGAGAGCAGCTGCTACAGAGAGAAGAATGGCTGCCCTCAAATTTCCGGCTAATAGTACAACCACTTCAGCTAATAGACTTTCAGACGCCAATGAATGTGGATTAGTCGGGAATACAACATCATTTTCCTGTTGTAATTCATCACTTGCTGGAAGAATGTCTCCGCTAAATGACGCCGAGTTCAAGACCTATTTGGCAAAGGCTAGAGAAAAGAGAGCCACAGTTTTGCAATCTGGTGCCGCTGAAGCAAAATTGGACGTTAGTGGTGTTACAATCTGCAAGCTCAAGAGAAAAGGTGGGGGAAACTCAGAGGAGGGGTCACCGTCACTTTCAGACACAGAACCTATTGCTGCACCACCTTTGAACAATGATTCCGCTGCATGCGATTCTAAGGTGGTTCTTCCTTTACCTAGGAAAAAGATTAAGAAGGAGAAGACGTGTGTCCCAATGGAAGAGACTGAAAAAGCATCGCTGTGGGACAGGTGTTTTGATGGAATGGGTTTTGTGGACAGCAATCTAAGCTTCACAAAAATGTGCAGGAGGTGA 2175 0.428 MASSQKKLHRSIFQLPPYFFDHCRFLPSPPSQTLQPPSNHIDHIQNAVVSGSSLTCNTCKAQFDSFQDQRSHLKSDIHRFNVKLTIAGKNTVKEEDFEDLTSDFVEDWDVSSIIRNESPGQSVIRGKSVESCKHKLFVCLQTGQRVSIWKCLIRNVSENVLYDDDVERLKSLTVEPRNNTRLRIVLLASGGHFAGCVFDGDTLVAHKTFHRYVARAKAGKKQSSKDAFGKTVHSAGDSLRLHMEHSLMKEVRELLTAWRPYFDASVCIFMHAPSSSRQLLFDREKPCFTNSQCVRNIAMIVRRPTLREAKRVYGQLTLVSYEADEKEIFPSNKQDVVPTLIDTPPASKVDMARLDINAKAEAFSSNKNDEHLASSKVKIESEFTINSTPLHQAAQSGDAVKVMELLEQGMDPCIKDDRGRTPYMLAPRKQIKKTFRRFMASNLDKWDWKAAQVFCPLTKEMEKYQAAMKAERRAKAKELKKIREAEEIKAQAEAAEKQAIAPTSIFWWWPGSPTSATGQSQPKSGAKLSKEEEIKRAQDAEREKRAAATERRMAALKFPANSTTTSANRLSDANECGLVGNTTSFSCCNSSLAGRMSPLNDAEFKTYLAKAREKRATVLQSGAAEAKLDVSGVTICKLKRKGGGNSEEGSPSLSDTEPIAAPPLNNDSAACDSKVVLPLPRKKIKKEKTCVPMEETEKASLWDRCFDGMGFVDSNLSFTKMCRR* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1884 724 MobiDBLite consensus disorder prediction 511 525 - -
Mtr7g1884 724 Coils Coil 530 550 - -
Mtr7g1884 724 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1 617 - -
Mtr7g1884 724 SUPERFAMILY Ankyrin repeat 371 441 IPR036770 -
Mtr7g1884 724 MobiDBLite consensus disorder prediction 511 532 - -
Mtr7g1884 724 Pfam Bacteroidetes VLRF1 release factor 184 321 IPR041175 -
Mtr7g1884 724 ProSiteProfiles Ankyrin repeat region circular profile. 385 417 - -
Mtr7g1884 724 MobiDBLite consensus disorder prediction 640 666 - -
Mtr7g1884 724 ProSitePatterns Zinc finger C2H2 type domain signature. 56 78 IPR013087 -
Mtr7g1884 724 Coils Coil 461 498 - -
Mtr7g1884 724 Gene3D - 331 493 IPR036770 -
Mtr7g1884 724 ProSiteProfiles Ankyrin repeat profile. 385 417 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1884 Mtr-Chr7 34917807 34931744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1884 1 565 C2H2 Transcription Factor Family AT1G01930 45.410 8.93e-154 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1884 K26089 - mtr:MTR_7g075185 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1884 7 34917807 34931744 Mtr7g1884 7 34917807 34931744 ECH