Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1883 ATGAATCCGTCGTCTATTTTGGTAGACAATTCTGTTGATAAATTGGTAAACACTATTCTTGAAGAAAATGAGGAACATGGACAAGAAAGTATTGCCGACATCAAACCTTGCTTGGATATGATATTTGAATCCGAGGTAGCTGCTTATGAATTTTATAATGAGTATAGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGGGAATAAAAGCAAAAAAGACGGGGTTTTAACTTCAAGAAGATTCACATGCTACAAAGAAGGTACACGAAGTGTTGACAAAAGACGTCAACCGACTGGGGAGTCTACGGCAGAAACTAGAACGGGGTGTAATGCACGTATGGGTATTTCACTTGATCGAAAGATAGGGAAATACAAGGTTGTTGACTTTGTACTAGAACACAACCACCTTCTTCAACCGCAAGAGTATGTTCACATGATTCGCTCTCATCGTCGCATATCTGAGGTACAAGCATCACAAATTATAATGGGAGATGAATCTGGATTAAGACCAAAAGAATTGCATGAATATATGTCCAAGCAGGCTGGTGGGATAGAGATGGTTGGTTTTACAAGAACAGACGCTAAGAATTTGCTTCGAACAAAAAGGATGGACTCACTAAAGTATGGTGAAGTGGGTGCATTGATGACTTATTTCAAACAAGAAAGCAAAAATCCATCTTTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCAGATGCACAAATGATCAATGATTATGGGTACTTTGGTGATGTCGTTACTTTTGACACCACATACAAGACAAATAAGGGTTATCGGCCATTGGGAGTAGTTGTTGGACTTAATAATCATCGACAAACAATCATTTTTGGTGCAACATTGTTATATGATGAAACAATACCTTCTTTTCAGTGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGGAAAAAAGCCTAAAACCATTCTAACGGATCAAGATGCTGCGATGGCAAAGGGTATTTCTTTAGTTATGCCGGAGACATTTCATGGATTATGTACTTGGCATATAAGACAAAACGCTCTAAGGCATGTGAACCATCTATATCAAAGGAGTAAGCATTTTTGTTCTGATTTTGAAGCTTGCATAGATCTACACGAAGAGGAAGATGAATTTTTGAATGCATGGAACTCTTTACTTGTTGAGCATAATGTTTTGGAAGGTTCGTGGTTGCATATGATTTTTCGATTTAAGGAAAAATGGGCATGGACTTATGTTCGGAAAACGTTCACTGCAGGTATGAGATCTACGCAATTAAGTGAAAGCTTTAATGCTGATTTGAAAAACCATTTGAAGTCGGATTTAAATTTAATACAATTTTTTACACACTTTAAAAGGGCTGTCAATGGTAAACGGAACAATGAGTCAGAAGCTGAATATGAGTCAAGACATAAGCTACCTAGATTGAAAATGAAGAAGGCTCGAATGCTCGTCCAAGCCGGAAATGTTTACACCCCAAAAATATTTGAGGAATTCCAAGAGGAATATGAGGAATATCAAGACACTTGCATAAAGGTGTTGAAAGAAGGTTTGTATGCTGTCACAAATTATGATAATGTAAAAGAGAGGACAGTTATGGGAAATCCTATGGAACAAAAAGTTTCTTGCGATTGTCGTAGATTTGAGACACACGGCATCTTATGTAGTCATGCTTTGAAAGTGTTGGATGGCATGAATATTAAGTTAATTCCTGAACACTATATACTAAAGCGATGGACAAGAGAGGCAAGGTTGGGAAGTAATCAAGATTGGAAAGGGATGCATGTTGAACTAGACATGAAAGCCCATTTCATGAAGCGATACAGTGAGTTATGTCCTCCAGCGATTAAATTGGCCAACAGAGCTTCAGAATCTCATGAAACTTACACTTTTTTGTCCAAAGTTTATGAAGAGTCCAGCAAAATAGTTGAAGATATGTTGGCAAACAAATGTGTGGATGGAGAATCAAGTGGAATGGTTCAGGTAACCATATCACTTGGAAATGATAAAACTCAGAACAACGTGGAAACTGTTGTCAAGGCAAAAGGCATAAAGAAGCTAGATTGTTCACGTTCCACTAAAAAACGAGCTAAATCTTGGGTTGAGAAAGATTCTAAAAAGAGAAACAAATACATTCAGTCTCAAAAAAAGAGAAAATCACAGGAAAAACAGTCGTTAGCGCAACCACCTAACCTCAATTCAATTTCTCTCAATGGAACTCATCATCAAGCTTCAATTCAAGGGACACAATCAAGTCAAGCTAACAACGAAATTCTATGTCAAACTGCAATCCAAGGGACACAATCAAGCGAAGTTGATAATGGAGCTCAATGTCAAGCTACAATCCAAGGGGCACAATGA 2382 0.3728 MNPSSILVDNSVDKLVNTILEENEEHGQESIADIKPCLDMIFESEVAAYEFYNEYSKRIGFGIRREYGNKSKKDGVLTSRRFTCYKEGTRSVDKRRQPTGESTAETRTGCNARMGISLDRKIGKYKVVDFVLEHNHLLQPQEYVHMIRSHRRISEVQASQIIMGDESGLRPKELHEYMSKQAGGIEMVGFTRTDAKNLLRTKRMDSLKYGEVGALMTYFKQESKNPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDVVTFDTTYKTNKGYRPLGVVVGLNNHRQTIIFGATLLYDETIPSFQWLFETFLKAMGGKKPKTILTDQDAAMAKGISLVMPETFHGLCTWHIRQNALRHVNHLYQRSKHFCSDFEACIDLHEEEDEFLNAWNSLLVEHNVLEGSWLHMIFRFKEKWAWTYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLIQFFTHFKRAVNGKRNNESEAEYESRHKLPRLKMKKARMLVQAGNVYTPKIFEEFQEEYEEYQDTCIKVLKEGLYAVTNYDNVKERTVMGNPMEQKVSCDCRRFETHGILCSHALKVLDGMNIKLIPEHYILKRWTREARLGSNQDWKGMHVELDMKAHFMKRYSELCPPAIKLANRASESHETYTFLSKVYEESSKIVEDMLANKCVDGESSGMVQVTISLGNDKTQNNVETVVKAKGIKKLDCSRSTKKRAKSWVEKDSKKRNKYIQSQKKRKSQEKQSLAQPPNLNSISLNGTHHQASIQGTQSSQANNEILCQTAIQGTQSSEVDNGAQCQATIQGAQ* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1883 793 Pfam SWIM zinc finger 549 569 IPR007527 GO:0008270
Mtr7g1883 793 SMART 26again6 548 575 IPR006564 GO:0008270
Mtr7g1883 793 MobiDBLite consensus disorder prediction 731 757 - -
Mtr7g1883 793 MobiDBLite consensus disorder prediction 702 757 - -
Mtr7g1883 793 PANTHER OS03G0181600 PROTEIN 19 655 - -
Mtr7g1883 793 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 655 IPR031052 GO:0006355
Mtr7g1883 793 Pfam MULE transposase domain 260 354 IPR018289 -
Mtr7g1883 793 MobiDBLite consensus disorder prediction 702 730 - -
Mtr7g1883 793 ProSiteProfiles Zinc finger SWIM-type profile. 535 573 IPR007527 GO:0008270
Mtr7g1883 793 Coils Coil 503 523 - -
Mtr7g1883 793 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1883 Mtr-Chr7 34914517 34917017 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr7g1883 MULE 6.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1883 - - cam:101500125 1214.52