Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1879 ATGGCCTCAAATCTCAACCGTAATGGCGCCCAAAGAGGAAGCGCCAAATTCGATCGTCCTCTCAAACCTCGTCCCCGAGCTTCCTCTCCCTTACCGGGAGGATCCGCTCCTCGCCGCTCTAACTCCGCCGCTAAAAACGATGCCGTGCCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCGCGAAATGCTGAAGAAGAGATGGCAGATGCTGATTTTGGTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGCAGAAACAATTGGGATTCAGACACTTATGAGTTTGATGAGGTGCTTACTCAATCTGCATCACAAAAGCGTGTCTATGAGGTTGTCGCTAAGCCAGTCGTAGAGAGTGTTCTTGATGGTTATAATGGGACTGTAATGGCTTATGGTCAAACTGGAACGGGGAAAACTTTTACTCTTGGACAATTGGGGGAAGGAGACACATCAAGTCGTGGAATCATGGTGCGTTCCATGGAGGATATTCTTGCCGATTTATCTCCAGATACTGATTCTGTCACTGTCTCATATCATCAGCTTTACATGGAGACTCTTCAGGACTTGCTTAATCCAGCAAACGATAACATTCCGATAGTGGAAGATCCAAGAACTGGTGATGTATCTTTGCCTGGGGCAACTATTGTAGAAATCAGGGATCAGCAGAGCTTTTTGGAGTTGTTAAGAATAGGGGAAGCTAACCGGGTTGCTGCTAATACCAAAATGAACACCGAGTCTTCTCGTAGTCACGCTATGCTGACGGTACATATTAAGAGGTCTGTCGTAGAAAGCGAAGATATTGTATCTAGTCAAAATGGTGATGCCTCTCACTTGATTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTAGCAGGTTCAGAGCGTGTTCACAAATCAGGAAGTGAAGGGCTCATGCTTGAGGAAGCTAAATCTATAAACCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTAGCAGAGAATAGTGCCCATGTTCCATTTCGTGATTCAAAGCTCACCAGAATGCTCCGAGATTCTTTTGGTGGCACAGCTAGGACTTCATTGATAGTGACTATTGGTCCATCTCCACGCCACAGAGGAGAGACTTCTAGCACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGCTTGTCACGAAAGCTTGAAATACAGTTAGATAAGCTCATTGCAGAAAATGAGAGGCAACATAAAGCTTTTGAGGATGACATTGAAAAAATAAATTTGGAGGCACAGTGTCGTATTTTGGAGGTTGAGAGAAACTTCGCTAATGCATTAGAGCAAGAGAAACTGAAATGCCAGATGGAGTATATGGGAATTGTAAAGGAGCTGGAACAGAAGTTGGTGTTGAATCAAGAAAGACATGATTGCAATGCTGATGATGGAGAGGGGCCTGCACAATCTTCTGCAGACGAAGTTGCTGAGATCAAAATGCTGCTCGAAACCGAAAGCAATAGAAGAAAGGCAGCTGAAGAAGAGCTAACACATCTAAAACGGCAGCTGGGGAAATATACAAAACCAGAGGAAGGAGAGGATTCCGAGATTACAAAGCTTCGCAACCTCCTGGAGGATGAAGCTCATCAGAAGAAGAAACTAGAAGAAGAAATAATAATATTAAGAAGTCAATTATTGCAAGCGAACTTTGAAACTGAGCAGATGAGAAGGTGTTTGGAAGGTGGAAGCTCTGGGAGCACATTTTCTGCAACAGATTCCTCCACGACTCAAGTTAGGCATTCCCAATTCAAAGATGCCGCAAATGGTCAGAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATATTGTCATTGCTGGAGTCGGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTGGCCAACCTAGCAGCCGAAGAGGCCAATCAAAAGAGAATTGTTGAATCTGGTGGTCTTACTTCCTTGCTGATGCTTCTTCGAAGATATGAGGATGAAACTGTTCGCAGAGTTGCTGCTGGGGCAATTGCCAATCTGGCTATGAATGAAGCGAATCAAGAACTTATAATGGCTGAAGGAGGAATTACTCTCTTGTCAATGGCTGCATCTGATGCTGAAGATCCCCAAACTCTTCGAATGGTTGCTGGAGCAATTGCTAACCTATGTGGAAATGATAAAATATTGATGACTCTGAGATCTCAGGGAGGTATCAAGGCATTACTGGGAATAGTAAGATGTGGACATCCAGACGTTCTTTCCCAAGTTGCACGAGGAATCGCCAATTTTGCAAAATGCGAGTCTCGAGCTTCTAATCAAGGGGTAAAAACTGGCAGGTCTATATTGATAGAAGATGGTGCACTTCCGTGGATAGTACAAAATGCTAATAATGAAGCTGCACCAATCAGGCGTCACATTGAGCTTGCACTCTGCCACTTGGCACAGCATGAAGCAAATGCCAAAGACATGATTAGCGGAGGTGCTCTTTGGGAACTCGTCAGGATTTCAAGGGATTGTTCACGAGAGGATATACGGAGTCTTGCTCATAGGACTCTCAGTTCTATCACACCATTCAAATCTGAATTGCGGCGATTGCGTGTAGAATATTGA 2667 0.4376 MASNLNRNGAQRGSAKFDRPLKPRPRASSPLPGGSAPRRSNSAAKNDAVPGRVRVAVRLRPRNAEEEMADADFGDCVELQPELKRLKLRRNNWDSDTYEFDEVLTQSASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGQLGEGDTSSRGIMVRSMEDILADLSPDTDSVTVSYHQLYMETLQDLLNPANDNIPIVEDPRTGDVSLPGATIVEIRDQQSFLELLRIGEANRVAANTKMNTESSRSHAMLTVHIKRSVVESEDIVSSQNGDASHLIKPSKPLVRKSKLVVVDLAGSERVHKSGSEGLMLEEAKSINLSLSSLGKCINALAENSAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEIQLDKLIAENERQHKAFEDDIEKINLEAQCRILEVERNFANALEQEKLKCQMEYMGIVKELEQKLVLNQERHDCNADDGEGPAQSSADEVAEIKMLLETESNRRKAAEEELTHLKRQLGKYTKPEEGEDSEITKLRNLLEDEAHQKKKLEEEIIILRSQLLQANFETEQMRRCLEGGSSGSTFSATDSSTTQVRHSQFKDAANGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVESGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMAASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGVKTGRSILIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEANAKDMISGGALWELVRISRDCSREDIRSLAHRTLSSITPFKSELRRLRVEY* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1879 888 SUPERFAMILY ARM repeat 619 882 IPR016024 -
Mtr7g1879 888 SMART kinesin_4 50 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g1879 888 Gene3D Kinesin motor domain 42 424 IPR036961 -
Mtr7g1879 888 Coils Coil 546 580 - -
Mtr7g1879 888 Pfam Kinesin motor domain 58 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g1879 888 ProSitePatterns Kinesin motor domain signature. 294 305 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr7g1879 888 Coils Coil 504 531 - -
Mtr7g1879 888 Coils Coil 878 888 - -
Mtr7g1879 888 ProSiteProfiles Kinesin motor domain profile. 52 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g1879 888 PANTHER KINESIN-RELATED 34 880 IPR027640 GO:0003777|GO:0007018
Mtr7g1879 888 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 630 672 IPR000225 GO:0005515
Mtr7g1879 888 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 671 714 IPR000225 GO:0005515
Mtr7g1879 888 PANTHER KINESIN-LIKE PROTEIN 34 880 IPR033291 GO:0008017|GO:0032886|GO:0048364
Mtr7g1879 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 428 IPR027417 -
Mtr7g1879 888 CDD KISc 52 392 - -
Mtr7g1879 888 Pfam Armadillo/beta-catenin-like repeat 663 700 IPR000225 GO:0005515
Mtr7g1879 888 Gene3D - 603 720 IPR011989 -
Mtr7g1879 888 PRINTS Kinesin heavy chain signature 128 149 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g1879 888 PRINTS Kinesin heavy chain signature 295 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g1879 888 PRINTS Kinesin heavy chain signature 344 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g1879 888 Gene3D - 721 884 IPR011989 -
Mtr7g1879 888 SMART arm_5 744 784 IPR000225 GO:0005515
Mtr7g1879 888 SMART arm_5 835 876 IPR000225 GO:0005515
Mtr7g1879 888 SMART arm_5 660 701 IPR000225 GO:0005515
Mtr7g1879 888 SMART arm_5 702 743 IPR000225 GO:0005515
Mtr7g1879 888 SMART arm_5 620 659 IPR000225 GO:0005515
Mtr7g1879 888 Coils Coil 410 441 - -
Mtr7g1879 888 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1879 Mtr-Chr7 34856373 34871776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1879 51 438 Calmodulin-binding Proteins AT5G65930 34.577 1.92e-47 182