Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1874 ATGAGTCTAAACTCTAGTGGCAGCGGAAGCGGTGGTGGCGGCGGAAGCAGTGGAAGCCCTTGTGGGGCTTGCAAGTTTTTGAGGAGGAAGTGTGTGCAAGGGTGTGTTTTTGCTCCATACTTCGATTCGGAGCATGGAACAACACACTTTGCAGCTGTGCATAAAGTGTTTGGGGCTAGCAATGTATCCAAACTCCTTCTTGGCATTCCAACTGGTAGGAGGCTTGATGCTGCAGTCTCTCTTTGCTATGAAGCTCAATCAAGGTTGAGAGATCCTATCTATGGATGTGTTGGTCACATCGTTGCCCTTCAGCAACAGGTGATGAGTTTACAAGCTGAACTCTCCTACTTACAAAGCCACATTAATTCATCTGGGCTAACCCAACAACCACCGCTACCACCACCACAGGCGACCGCGGCCCCAACAGTCTTCTCCTTTGCTGACCTACCACCAACCACCGCCACAACCATGCCGGTCACCTATGATATGTCTACACTTTTCGACTCAATGGGACAACCTTCATTCTCCATGCAACAACAGAGGTCCAGTATTGATCCACGTCAATACTTAGCTGCTCATCATCATGCCCCAACATCAACCACTGCTGGGATTCAATCAGTGGCATGTGACCTTACTCATAGACAAATTGGCTCTTCATCTGTACCATCCTCCAATGCCTCATCATCTGCTTCGTTTTCCAAATTTTCTAAATGA 714 0.4818 MSLNSSGSGSGGGGGSSGSPCGACKFLRRKCVQGCVFAPYFDSEHGTTHFAAVHKVFGASNVSKLLLGIPTGRRLDAAVSLCYEAQSRLRDPIYGCVGHIVALQQQVMSLQAELSYLQSHINSSGLTQQPPLPPPQATAAPTVFSFADLPPTTATTMPVTYDMSTLFDSMGQPSFSMQQQRSSIDPRQYLAAHHHAPTSTTAGIQSVACDLTHRQIGSSSVPSSNASSSASFSKFSK* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1874 237 ProSiteProfiles LOB domain profile. 19 121 IPR004883 -
Mtr7g1874 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 213 - -
Mtr7g1874 237 MobiDBLite consensus disorder prediction 172 197 - -
Mtr7g1874 237 MobiDBLite consensus disorder prediction 172 186 - -
Mtr7g1874 237 MobiDBLite consensus disorder prediction 216 237 - -
Mtr7g1874 237 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 213 - -
Mtr7g1874 237 Pfam Lateral organ boundaries (LOB) domain 20 118 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1874 Mtr-Chr7 34820323 34824599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1874 23 234 AS2 family AT2G45420 51.111 8.51e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr7g1874 LOB 2.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1874 K21994 - gmx:100777737 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1874 7 34820323 34824599 Mtr8g1125 8 13726345 13733559 PCT