Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1873 ATGGATTTGGGATGTGGTGATGAGGGTGGTGGACCTTGTGGAGCCTGCAAGTTTTTGAGGAGAAAGTGTGTGAAAGGTTGTTGCATATTTGCACCATATTTTGAGTCATCAGGTCAAGGAAGTGCTCATTTTGCTGCAGTTCATAAGGTTTTTGGTGCTAGCAATGCTGCTAAACTACTCACACGTATTCCAGTTCATAAGCGTCTTGATGCTGTTGTTACTCTTTGCTATGAGGCTCTTGCTAGGGCTACTGACCCTGTTTATGGTTGTGTTGCTCACCTCTTTGCTCTTCAACAACAGGTTGTGGAGTTGCAAGCAGAGTTAGCCTATGTACAAGCCCGTCTTTCAATATTGAATCGAATCTCTGAAGATCCTCAATTTCAACAGCCTCAAAGCTCTTCAATATCACCAACTTTGCAATCATCCTTACTTCATCATTTCTCATCAAACAATGAAACTTCTTACATGTCCATGCACTTTGGTCATCCTCTTCAAAATCAATATCATCCAACACCTTTTGAAAATCCATCATACTATTCTTATAATCAACAACTTCATGACCAGGAATTCCAAGCTTTGCCTAGAGAATTTTAG 594 0.4057 MDLGCGDEGGGPCGACKFLRRKCVKGCCIFAPYFESSGQGSAHFAAVHKVFGASNAAKLLTRIPVHKRLDAVVTLCYEALARATDPVYGCVAHLFALQQQVVELQAELAYVQARLSILNRISEDPQFQQPQSSSISPTLQSSLLHHFSSNNETSYMSMHFGHPLQNQYHPTPFENPSYYSYNQQLHDQEFQALPREF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1873 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 6 189 - -
Mtr7g1873 197 PANTHER LOB DOMAIN CONTAINING PROTEIN 6 189 - -
Mtr7g1873 197 Pfam Lateral organ boundaries (LOB) domain 12 112 IPR004883 -
Mtr7g1873 197 ProSiteProfiles LOB domain profile. 11 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1873 Mtr-Chr7 34801799 34804146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1873 15 132 AS2 family AT2G45410 71.429 1.05e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr7g1873 LOB 3.7e-34 No_clan