Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1871 ATGGAGGGGAGAGAAGGAAACAACACTGGAGTAACAGTGATAGGAGCAGAAGCTCCATCAACTTATCATATGGCACCAAGGAGTGAAGCTCCAACTCAACATGTAACTGCTCCTGAATCAGGAAATGTGGCTCTTACTGTTTCGCCTGTGAGTCTGGGAATGGATGGAGGAACACTTAAGAAGAAAAGAGGTAGACCAAGGAAATATGGGCCAGACGGGTCGGTTACTGCTGTGGCATTGTCACCGTTGCCAATCTCGTCTTCAGCTCCTTTTTCTAATGAATTTTCATCCGGGAAGCAGGGGAAACCGAAGGGAATGGAGTTCAAGCAGTCAAAAAAAGCCGGAGCTGATCCTCTAGGTGACTCGGTCGGCACCAATTTTATGCCGCATATCATTACTGTCAATGCTGGTGAGGACATTACAATGAAGGTTATATCCTTTTCGCAACAAGGACCACGAGCTATATGCATCCTGTCTGCTAGTGGCGTGATTTCAAATGTTACGCTTCGTCAGCCTGATTCTTCTGGCGGAACTTTGACCTATGAGGGTCGTTTCGAGATACTTTCACTGTCCGGATCATTCATGCCTACCGACAACCAAGGAACAAGAAGCCGGTCTGGTGGAATGAGTGTTTCTTTGTCAAGCCCTGATGGTCGTGTCGTAGGCGGTGGAGTTGCCGGTCTTCTTGTAGCTGCCACTCCTGTGCAGGTGGTTGTTGGAAGTTTTCTGCCAAGTAACCAACAAGACCAGAAAATAAAGAAGCCAAAATCTGACTATGCATCACCTACCATTACCGAACCTATTGCAGTGTATTCAGCACCTCCGTCAACCAATGGTGAAAGGATTGATGTAATGAGTGGACATCTACTTCAAAATCCGGGAACATTAAACACAAATCTTACTTCTCCCTCGGCCTTTCGCCGAGAAAACTGGGTTAACATGCACACCATGCCGGACTCAATGAAGTCTGCAACTGATATTAACATATCTTTGCCAGATAATTAA 1005 0.4627 MEGREGNNTGVTVIGAEAPSTYHMAPRSEAPTQHVTAPESGNVALTVSPVSLGMDGGTLKKKRGRPRKYGPDGSVTAVALSPLPISSSAPFSNEFSSGKQGKPKGMEFKQSKKAGADPLGDSVGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAATPVQVVVGSFLPSNQQDQKIKKPKSDYASPTITEPIAVYSAPPSTNGERIDVMSGHLLQNPGTLNTNLTSPSAFRRENWVNMHTMPDSMKSATDINISLPDN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1871 334 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 333 - -
Mtr7g1871 334 MobiDBLite consensus disorder prediction 1 73 - -
Mtr7g1871 334 MobiDBLite consensus disorder prediction 33 47 - -
Mtr7g1871 334 Gene3D - 129 259 - -
Mtr7g1871 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 242 IPR005175 -
Mtr7g1871 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 333 IPR039605 GO:0003680
Mtr7g1871 334 MobiDBLite consensus disorder prediction 89 120 - -
Mtr7g1871 334 CDD DUF296 129 219 IPR005175 -
Mtr7g1871 334 ProSiteProfiles PPC domain profile profile. 124 265 IPR005175 -
Mtr7g1871 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1871 Mtr-Chr7 34777525 34781584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1871 6 269 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.475 3.59e-98 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1871 7 34777525 34781584 Mtr8g1128 8 13777138 13783053 PCT