Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1858 ATGGAAGAAGGGAAAGGAAGAGTTTGTGTGACTGGAGGTACAGGGTTTATTGGTTCATGGATTATTAAGAGACTCCTTGAAGATGGTTACACTGTTAATACCACTGTTAGATCTAATCCAGCAGGCCAAAAGAAAGATGTTAGCTACCTCACAAATCTTCCAAATGCATCTCAAAACCTACAAATTTTCAACGCTGATCTTTGCAACCCAGAAAGTTTCGATGCAGCAATTGAAGGGTGCATTGGAATATTCCACACAGCTACTCCAATTGATTTTGAAGAGAACGAACGGGAGGAAATAGTGACAAAAAGAACCATTGATGGAGCATTAGGAATTCTAAAAGCATGCAAAAATTCAAAGACAGTGAAAAGAGTTATTTACACTTCAAGTGCTTCTGCTGTGTATATGCAAGACAAAGAAGAAGATGTAATGGATGAAAGTTATTGGAGTGATGTGAATATTCTTAGAAATTTGAAGCCTTTTGCTTGGTCATATGCTGTTTCTAAAACCCTAGCTGAGAAAGCTGTTCTTGAATTTGGAGAACAACATGGTTTGGATATTGTAACTCTTGTACCAAGTTTTGTTGTTGGACCCTTTATTTGCCCTAAGCTTCCTGGCTCTATCTTTAGTTCACTAGCTTTCTTATTTGGTGATATTGACAATAATCCATTGGCAGCCTCTCGTCTCCATATGGTGCATGTTGATGATGTGGCAAGAGCACATATATTCTTACTTGAACATCCTAATCCAAAAGGAAGATATAATTGTTCACCATTCCTTGCAACTATTGATGAAATAGTTCACATTGTTTCTTCCAAGTACCCTAAATTTCAAATACCAACATCCAAAGAGCTTATGGGAGTTAAAGGTCCTAAGCTTCCACATTTAACCTCAAAGAAACTCATGGATGATGGATTCAAGTTCAAGTATAGCCTTGAGGAAATGTTTGAGGACGCAATTGAATGTTGCAAGGAAAACGGTTATCTTTGA 990 0.3747 MEEGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRSNPAGQKKDVSYLTNLPNASQNLQIFNADLCNPESFDAAIEGCIGIFHTATPIDFEENEREEIVTKRTIDGALGILKACKNSKTVKRVIYTSSASAVYMQDKEEDVMDESYWSDVNILRNLKPFAWSYAVSKTLAEKAVLEFGEQHGLDIVTLVPSFVVGPFICPKLPGSIFSSLAFLFGDIDNNPLAASRLHMVHVDDVARAHIFLLEHPNPKGRYNCSPFLATIDEIVHIVSSKYPKFQIPTSKELMGVKGPKLPHLTSKKLMDDGFKFKYSLEEMFEDAIECCKENGYL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1858 329 PANTHER DIHYDROFLAVONOL REDUCTASE 1 321 - -
Mtr7g1858 329 CDD FR_SDR_e 8 306 - -
Mtr7g1858 329 Pfam NAD dependent epimerase/dehydratase family 8 255 IPR001509 -
Mtr7g1858 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 321 - -
Mtr7g1858 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 327 IPR036291 -
Mtr7g1858 329 Gene3D - 5 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1858 Mtr-Chr7 34640904 34644301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1858 5 320 Monolignol Biosynthesis Gene Families AT1G76470 38.365 2.16e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1858 - K13265 gmx:102659875 551.206