Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1850 ATGTACAAGAGCATCAACCCTGATGAGGCTGTTGCTTTTGGAGCAGCTGTGCAGGCTGCTTTGTTGAGTGATGACATTAAGAATGTTCCAAACTTAGTGTTGATCGATCTGGAAAAACGGGGCGTTACAATCGATGTTACTCCACTGTCTTTAGGTTGGAGGCTAGAGCATAATCAAATGGGTGTAGTTATTCCTAGGAATACTACTATACCTGTCAAGACGACAAAAGTTTTTTATACAAGTGAAGATAACCAATCCTCTGCCTTGATCAGTGTTTATGAGGGGGAGAGAACTAAGGCCAGTGACAACAATCGGCTTGGCTCTTTTACTCTCTCTGGATTCCCTCCTGCCCTTCGCGGCCATCCTTTTGATGTATGTTTTACAATTGATGGAAACGGTACATTGACAGTTGCTGCCAAGGAAGTATCCACTGGCAGTACAAATGAGATTATAATTACTAATTACAAAGAAAGGCTATCAACAGAAGAAATTAAAAAGTTGATTCAAGAAGCTGAGAACCACCGTGATGAAGATGAGAAATTCCTACAAATGGCTCAACTGAAAAATGCATTGGATAGCTGCATTTATAAAATCGAAACTGCTTTAAAGAAGCAGAATGCTAACTTGAAGCTCTCCACACAAGAGAACAGGAAGATGAATGTTGCAATTAGAATGGCAAAAAATTTGCTTGATGAGAATGACCTTCATGAAGTAGATGTTCTTGAGGATCATTTGGAGGATCTTGAAAGTATGTTTGAAGACATTATAGATAAGATTGGTTAG 783 0.3934 MYKSINPDEAVAFGAAVQAALLSDDIKNVPNLVLIDLEKRGVTIDVTPLSLGWRLEHNQMGVVIPRNTTIPVKTTKVFYTSEDNQSSALISVYEGERTKASDNNRLGSFTLSGFPPALRGHPFDVCFTIDGNGTLTVAAKEVSTGSTNEIIITNYKERLSTEEIKKLIQEAENHRDEDEKFLQMAQLKNALDSCIYKIETALKKQNANLKLSTQENRKMNVAIRMAKNLLDENDLHEVDVLEDHLEDLESMFEDIIDKIG* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1850 260 Coils Coil 238 258 - -
Mtr7g1850 260 PRINTS 70kDa heat shock protein signature 5 25 - -
Mtr7g1850 260 PRINTS 70kDa heat shock protein signature 40 59 - -
Mtr7g1850 260 PRINTS 70kDa heat shock protein signature 120 136 - -
Mtr7g1850 260 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 42 192 IPR029047 -
Mtr7g1850 260 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 187 259 IPR029048 -
Mtr7g1850 260 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 258 - -
Mtr7g1850 260 Gene3D - 188 260 IPR029048 -
Mtr7g1850 260 Coils Coil 157 177 - -
Mtr7g1850 260 Pfam Hsp70 protein 3 258 IPR013126 GO:0005524|GO:0140662
Mtr7g1850 260 PANTHER HEAT SHOCK PROTEIN 70KDA 1 258 IPR013126 GO:0005524|GO:0140662
Mtr7g1850 260 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 39 187 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1850 Mtr-Chr7 34529503 34532306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1850 1 259 Calmodulin-binding Proteins AT3G12580 48.276 1.48e-69 224