Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1815 ATGGCTTCCTTACTATCTACAACAACTACACCTACACTTCAACATACTCATAATAAAATCTGCTTCTCTCCTCTAAAACTCACCACTCCATTAAGCAATTCTTTCTTAACAACATACCTTTTCAACAAGAATCACTCTACAAGGTGCAATGCATTTTTTGATATTATCCCCAAAGACTTGTTATTGAACAATACATTTTATTTGGATAAGTTTCAGAGTGTGAGTGAGGATTTATCAGACATGCAGAGGTTGGAGATTTTGGTCTTTGTTGGTTTGGCATGGTTTTATCTAACTGCAAGACCAGGTGTTCTTATTGGTGCTATTGATGCATACCTTTTGGCTCCAATGCAATTTGTTTTGGATAGTTTATCTGGAAGGAGAAATTTGAAGAGGAGTGATTTCTTGATTGGTGGTAAGATAGGAGAAGGGTCATTTGGTGTTGTTTATTCTGCTGTTTTGGTAACAAAGGATGTGAAAGAGATGATGCTCAAGAGTGGAGGAGGTAAGTTGGATGCTAAATCTAAGGATAAAGTCATTCTTAAAAAGGTGAAGGTTGGAATTGAAGGAGCTAAAGAATTTGGTGATTATGAAGAGTGGTTCAATTATAGACTCTCAAGAGCAGCTCCTGAAACATGTGCCAAGTTCCTTGGAAGTTTTGTAGCTGATAAAACCAATTCACAATTCACAAAAGGTGGAAAATGGCTTGTTTGGAAATTTGAGGGAGACCGCACTCTTGCTGATTATATGACAGATAAAAACTTCCCTTCGAACTTAGAATCTGTCATGTTTCGAAATGCGTTGCAAGGTATAGACTCTTCAAAAAGAAATGCATTGATCATCAAGCAAATAATGCGCCAAATCATTACATCTCTTAAGAAAATTCACGACACTGGCATCGTTCACAGGGATGTAAAGCCTTCCAACTTGGTTGTTACAAAAAAAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACCTTAGAATTGGAAAGAATTATGTGCCTAATTATACACCTTTGGATCCTGATTACTGTCCTCCTGAACTATATGTTCTACCACAAGAAACACAAAGTCTTCCTCCAGAACCAATTGCAGCTTTAATCTCACCAATCTTGTGGCAGTTAAACAGTCCTGATCTCTTTGATATGTATTCTGCTGGAATTGTACTCTTGCAAATTGCAATACCAACCTTAAGGTCTCAAGCTGCTTTGAAGAATTTCAATTTGGAAATGAGGACATATGGATATGATTTGAACAAATGGAGGGACTCTACTCGCATGAAGTCTAACTTCCAAATCCTTGATAGTGATTCTGGTAGAGGTTGGGACTTAGCATCAAAGCTTATCTCCAAAAGAAGTTCCGAAAGAAGAAGGCGTTTATCTGCTGCTTCTGCTTTGAGGCATCCTTATTTTCTTCTTGGTGGTGATCAGGCAGCTGCAGTTCTTTCTAAATTCAGCTTTAGCACAAAGTGA 1476 0.3787 MASLLSTTTTPTLQHTHNKICFSPLKLTTPLSNSFLTTYLFNKNHSTRCNAFFDIIPKDLLLNNTFYLDKFQSVSEDLSDMQRLEILVFVGLAWFYLTARPGVLIGAIDAYLLAPMQFVLDSLSGRRNLKRSDFLIGGKIGEGSFGVVYSAVLVTKDVKEMMLKSGGGKLDAKSKDKVILKKVKVGIEGAKEFGDYEEWFNYRLSRAAPETCAKFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMTDKNFPSNLESVMFRNALQGIDSSKRNALIIKQIMRQIITSLKKIHDTGIVHRDVKPSNLVVTKKGQIKLIDFGAATDLRIGKNYVPNYTPLDPDYCPPELYVLPQETQSLPPEPIAALISPILWQLNSPDLFDMYSAGIVLLQIAIPTLRSQAALKNFNLEMRTYGYDLNKWRDSTRMKSNFQILDSDSGRGWDLASKLISKRSSERRRRLSAASALRHPYFLLGGDQAAAVLSKFSFSTK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1815 491 Pfam Protein kinase domain 279 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1815 491 Gene3D Phosphorylase Kinase; domain 1 123 239 - -
Mtr7g1815 491 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 1 489 - -
Mtr7g1815 491 Gene3D Transferase(Phosphotransferase) domain 1 266 474 - -
Mtr7g1815 491 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 489 IPR044803 GO:0004674|GO:0009579
Mtr7g1815 491 ProSiteProfiles Protein kinase domain profile. 134 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1815 491 SMART serkin_6 134 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1815 491 SUPERFAMILY Protein kinase-like (PK-like) 131 473 IPR011009 -
Mtr7g1815 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1815 Mtr-Chr7 34174610 34178320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1815 104 344 MAP Kinase Kinase Gene Family AT4G29810 23.984 2.88e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mtr7g1815 Pkinase 8.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1815 - - gmx:100795624 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1815 7 34174610 34178320 Mtr7g1815 7 34174610 34178320 ECH
Mtr8g0016 8 243596 246387 Mtr7g1815 7 34174610 34178320 PCT