Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1809 ATGGAAAATGAAAATCTAGCTCATGGTGGTCGTGGGAAGGTAGTTGATGAGTTGTTAAGAGGGCGTGAACTTGCAAACAAACTTAGAAATATTCTGAATGAAAGTGGTGATATTTATAATAATGATGGATCAACAATACCACCATTTGCTGAAGATCTTTTGAAGGAAGTGCTTACCACCTTTACTAATTCTCTCTTGTTCTTGAACAATAATCCTACTTCAGAGGGCTCTGATATGCAACTCACCAAATCTGAAGACTCTTTGGAAAGTAATTGCAAGAGTTCCATTGTAAAGGAAAGAAGAGGCTGTTACAAAAGAAGAAAAATTTCACAAACATGGGAGAAGGAGTCTGAACAGCCTGAAGAAGATGGTCATCAGTGGAGAAAGTATGGCCAAAAAAAGATCTTGCACACCGATTTTCCAAGGAACTATTACAGATGCACTCACAAAAATGATCAAGGTTGCAAAGCAATAAAACAAGTCCAAAGAATTCAAGAGGATCCACCTCTTCACAGGACAACCTATTCAGGCCATCATACTTGTAGAATCTTGCAAAACCCTGAGATCATAGTAGATTATCCTACTGATCACTCTTCCATGTTTCTTAGTTTTGACAACTCTTTCCCAACACCAGCCAAACAAGACTGTCCTTTTCTCTCAGTGAAAAAGGAGGAGTGCAAGGAAGAGGTTGTTCATCCTCCTCCTTCTTCAAATGATTACCTCTCTGGACTCACTTTTGATGATCCAGAAAAGGATGTCACACTATCATCAACACTTGATTCTCATGATCACTTAGGTGTCCATATTTCTGATATCATGTATGATGATGTCCTTAATTGGCCTCTTTCTTGA 852 0.3862 MENENLAHGGRGKVVDELLRGRELANKLRNILNESGDIYNNDGSTIPPFAEDLLKEVLTTFTNSLLFLNNNPTSEGSDMQLTKSEDSLESNCKSSIVKERRGCYKRRKISQTWEKESEQPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKNDQGCKAIKQVQRIQEDPPLHRTTYSGHHTCRILQNPEIIVDYPTDHSSMFLSFDNSFPTPAKQDCPFLSVKKEECKEEVVHPPPSSNDYLSGLTFDDPEKDVTLSSTLDSHDHLGVHISDIMYDDVLNWPLS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1809 283 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g1809 283 Gene3D WRKY domain 103 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g1809 283 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g1809 283 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 277 IPR044810 GO:0003700
Mtr7g1809 283 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g1809 283 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g1809 283 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 12 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1809 Mtr-Chr7 34131192 34133840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1809 13 181 WRKY Transcription Factor Family AT3G56400 39.560 2.44e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr7g1809 WRKY 4.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1809 - - mtr:MTR_7g073430 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1809 7 34131192 34133840 Mtr7g1809 7 34131192 34133840 ECH
Mtr7g1809 7 34131192 34133840 Mtr8g0017 8 254321 255698 PCT