Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1721 ATGGGTGGCTGTTGCAGCCACGATGTTGCTCTTAGAGGAGGAGGCAGAATTGAAACCGAGGTGAATGATGGAGAATATGAATATGATGATAGTGAAGATAATAATAATAATATTAATAATAATGATGCTGTCACGTATCAAAATGATGGAACTATGGTTAGATTAAAAGGGTTTTCTAAGTTTGTTTCAATGTATACACAACAAGGTATGAAAGGTGTTAATCAAGATTCAATGACTGTTTGGGAGGACTATTGTGGAGAAGAAGGCATGGTCTTCTGTGGCGTGTTTGACGGTCATGGTCCTCTAGGCCACAAAGTGTCGCAATTTATTCGCGACAATCTACCCTCGACACTATCTGCAGCAATCAAAATGGCACAACAGAAGACCAACAAATACTACGATGCTAATGACGTAGATACCGACAATTTTGATGATGTCCACCACAATAATAACCGCATCAACAACATATCCCTTGCTTCATGGGAAGGATGTTTTCTGAAATCCTTTGATGAAATGGATGATCATCTTGCTCGGGAAGTTAATACTGATAGCTATTGCAGTGGTTGCACAGCTGTAGCTTTAATTAAACAGGGAGACCAGTTGATAGTTGGAAATTTGGGCGATTCTCGTGCAGTTCTTTGCACAAGGGATAGAGATCAACTTATTGCTGTTCAACTTACCGTTGATTTGAAACCGGATATTCCAAGTGAAGCTTCAAGAATCTGTAGCTGTGAAGGAAGGGTTTTCGCAGCGGAAGAAGAACCGGATGTGTACAGAATATGGATGCCTGATGATGACTGTCCTGGATTAGCTATGTCAAGAGCCTTTGGAGACTTTTGTCTAAAAGATTATGGCCTTATTGCAACTCCAGATGTGTTTTACAGAAAAATTACCAAGCAAGATGAATTTGTTGTTTTGGCAAGTGATGGGATATGGGATGTGCTGACAAACAATGAAGTAATAAACATAGTTGCTTCAGCGCCAAGAAAGTCAACAGCAGCGAAGATGTTAGTAAAACGCGCTGTTAAAGCCTGGATGTACAAGTATCCTGGATCGAAAATCGACGATTGTGCAGCCGTATGCTTGTTTCTTGATGATCAACCTATTTTATCACATTCTCAATCGAGTTTCAAGCACTCTAAAAGTCGACATCGTCGCAGTAAGCACTCTAAATCACATCGAAATGAAGACAATGAAACTGTTGCTGGAAAAGTTGGAATGGAACTGGATGAAGAATGGAAAGCTCTTGAAGGGTTAGCTAGAGCAAATTCAATATCAAAACTTCCAAGGCTTGCTAGAAATATGAGTAAAAGACAATCATCTAAGCACCTTAATGGAAGTTGA 1344 0.3981 MGGCCSHDVALRGGGRIETEVNDGEYEYDDSEDNNNNINNNDAVTYQNDGTMVRLKGFSKFVSMYTQQGMKGVNQDSMTVWEDYCGEEGMVFCGVFDGHGPLGHKVSQFIRDNLPSTLSAAIKMAQQKTNKYYDANDVDTDNFDDVHHNNNRINNISLASWEGCFLKSFDEMDDHLAREVNTDSYCSGCTAVALIKQGDQLIVGNLGDSRAVLCTRDRDQLIAVQLTVDLKPDIPSEASRICSCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIATPDVFYRKITKQDEFVVLASDGIWDVLTNNEVINIVASAPRKSTAAKMLVKRAVKAWMYKYPGSKIDDCAAVCLFLDDQPILSHSQSSFKHSKSRHRRSKHSKSHRNEDNETVAGKVGMELDEEWKALEGLARANSISKLPRLARNMSKRQSSKHLNGS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1721 447 ProSiteProfiles PPM-type phosphatase domain profile. 61 364 IPR001932 -
Mtr7g1721 447 MobiDBLite consensus disorder prediction 429 447 - -
Mtr7g1721 447 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 427 - -
Mtr7g1721 447 MobiDBLite consensus disorder prediction 427 447 - -
Mtr7g1721 447 MobiDBLite consensus disorder prediction 377 391 - -
Mtr7g1721 447 SUPERFAMILY PP2C-like 52 366 IPR036457 -
Mtr7g1721 447 Gene3D - 52 366 IPR036457 -
Mtr7g1721 447 MobiDBLite consensus disorder prediction 374 403 - -
Mtr7g1721 447 Pfam Protein phosphatase 2C 132 343 IPR001932 -
Mtr7g1721 447 SMART PP2C_4 52 362 IPR001932 -
Mtr7g1721 447 PANTHER ALPHABET, ISOFORM E-RELATED 1 427 - -
Mtr7g1721 447 CDD PP2Cc 61 364 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1721 Mtr-Chr7 32808048 32811251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1721 1 368 PP2C-type Phosphatase Gene Family AT5G01700 50.000 4.43e-129 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1721 - - mtr:MTR_7g070510 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1721 7 32808048 32811251 Mtr7g1721 7 32808048 32811251 ECH
Mtr7g1721 7 32808048 32811251 Mtr4g0322 4 3903571 3906283 PCT