Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1708 ATGAAGATTGATACCGTTTCTGGACAAAGGAAATCACGCAAGAGACGCAGTGGTGGAAGAACTGACTCAGTGGAAGACACTCTTGAGAAGTGGAAGAACTACAACAGACAGCAACAACAAAAACTTGGTTGTAGAGGTAATGGAGCTGATAAGATTCACAAAGTTCCTGCAAAAGGTTCAAGAAAAGGGTGCATGAGAGGTAAAGGTGGTCCTCAGAATTCTGATTGCAATTTCAGAGGAGTTAGACAGAGAATTTGGGGTAAATGGGTTGCTGAGATTCGTGAACCAATCAATGGTAAACATGTTGGTGAGAAAGCAAATAGGCTTTGGCTTGGTACTTTCACTACAGCACATGATGCTGCTCTTGCTTATGATAAAGCAGCTAAGGCTATGTATGGACCTAGTGCTCGCTTGAACTTCCCTGATGGATCGCCATCATCATCAAGCGGTGGTTCTGCAGATTCAATGAATGGCGAGGAGGATCTTGGAAAAGCTGAAGAGTTGGAGGGTAATCTTCATCAGTTTGAGGAAGAGAATAAGATTCTTTCTAAAGATTTTGTTTCTGATGATGACTCGGTAGAGGAATCAAAGGAAGTGATGATAGATGGTACTGTCCAATGTCCAACAAATAAGAAATGTAAGAAAATGGTTCATCAAAGGTCTTACAAGAATGTCAAATCTGAAACACATGGAGAAAATAAACGACTAGAGAGAGAATTGGGGAAGGTTTTGGAGAATTCTAGCCTGGATGGAGAGTTTAATCATGTGCAGAAGGAGCCTATGGATGCAGGCATGAACTCAGGAGCTGATCGTAGATCTTCTGATATAGCAGATCTGGTGCAGAGTGAGGAAACAATAAGAGGATCACCGGAGGATTTGAAATCCTTTGAGTTGAGCTGCAGCAATCATTTCTTTGGAAACCAGCACAATATGCTTCCAGATAGCAATCCAAGATCAAGTTCTGAGCATTGTAACATCAAAACCGAGGCTTCTCTTGCAAAGAAACACAAGAAGGAAGAAAATGGACATTTCTTAAGCCATGCTCGGTCACAAAATGAGCAAAATAAAAATGGATATTTTGATGAAATGGAAAGTGAGCTTAAGGGATTGGAATACAAGCTGGGAGGCCAATCTATTGATTGCAAGAATGATGAGGCACAAATAGTAGTACCTTACATGCAGGGAATTCATCTGTTTGGTGGTGACAGTGTTGGACCAATTGAAAGAATGTCACAAGTTGAGGCTTTGAACAACAATACTAATAAAAACACTAAATTGAAAGAGAAAGGAAGTAATGGAAATGCATTTCATGGACTTAGTTCAGGGCAAAGTAGGAAGCTGAGTGATCTTTCTCAACAGTTGCAGAAATTGGGTGGTTACTTGCCTGAAAATTGGAATAATATGCAGTTTGCAGATCTTGAAGTTGGTTATGATTATAGTTTCTTAAAACCTGATTATGATTTTGGTTTATTAGAAGAGAAGAAGTTACTTGATATATGTTTTTCACATATAGGATCTTGA 1521 0.3951 MKIDTVSGQRKSRKRRSGGRTDSVEDTLEKWKNYNRQQQQKLGCRGNGADKIHKVPAKGSRKGCMRGKGGPQNSDCNFRGVRQRIWGKWVAEIREPINGKHVGEKANRLWLGTFTTAHDAALAYDKAAKAMYGPSARLNFPDGSPSSSSGGSADSMNGEEDLGKAEELEGNLHQFEEENKILSKDFVSDDDSVEESKEVMIDGTVQCPTNKKCKKMVHQRSYKNVKSETHGENKRLERELGKVLENSSLDGEFNHVQKEPMDAGMNSGADRRSSDIADLVQSEETIRGSPEDLKSFELSCSNHFFGNQHNMLPDSNPRSSSEHCNIKTEASLAKKHKKEENGHFLSHARSQNEQNKNGYFDEMESELKGLEYKLGGQSIDCKNDEAQIVVPYMQGIHLFGGDSVGPIERMSQVEALNNNTNKNTKLKEKGSNGNAFHGLSSGQSRKLSDLSQQLQKLGGYLPENWNNMQFADLEVGYDYSFLKPDYDFGLLEEKKLLDICFSHIGS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1708 506 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Mtr7g1708 506 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Mtr7g1708 506 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 376 - -
Mtr7g1708 506 CDD AP2 76 140 IPR001471 GO:0003700|GO:0006355
Mtr7g1708 506 SMART rav1_2 77 147 IPR001471 GO:0003700|GO:0006355
Mtr7g1708 506 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 376 - -
Mtr7g1708 506 MobiDBLite consensus disorder prediction 333 356 - -
Mtr7g1708 506 MobiDBLite consensus disorder prediction 138 161 - -
Mtr7g1708 506 MobiDBLite consensus disorder prediction 1 77 - -
Mtr7g1708 506 Pfam AP2 domain 76 133 IPR001471 GO:0003700|GO:0006355
Mtr7g1708 506 SUPERFAMILY DNA-binding domain 77 142 IPR016177 GO:0003677
Mtr7g1708 506 MobiDBLite consensus disorder prediction 140 155 - -
Mtr7g1708 506 Coils Coil 165 185 - -
Mtr7g1708 506 Gene3D AP2/ERF domain 77 142 IPR036955 GO:0003700|GO:0006355
Mtr7g1708 506 MobiDBLite consensus disorder prediction 18 32 - -
Mtr7g1708 506 MobiDBLite consensus disorder prediction 422 442 - -
Mtr7g1708 506 ProSiteProfiles AP2/ERF domain profile. 77 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1708 Mtr-Chr7 32670696 32673599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1708 13 158 AP2-EREBP Transcription Factor Family AT2G40340 54.110 9.07e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g1708 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1708 - - cam:101505842 700.664