Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1705 ATGCAAGTTGACAAGATGCCCGCAAAGATTTCAGAGCAAGGGAGCGAGGAAGATGATTCAAAGCGATCTAATATTTCCAATGGCTTGTGTATATCATCATCAATGTGTGTTGTTCTATTAGGTGATATGGAACAAGAGAGGTACTTTTTCAGTACTAAAGAAGCCAAGTATCCAAATGGGAACTGATCTAACAGAGCTAGAAAATCTGGTTATTGGAAGGAAACTGGTTTGGACAAACAAATCATGAATTCGAAGACTCGTGAAGTTGTTGGTATGAAGAAAACTCTTGTTTTCTACAGAGGCAAACCACCTCATGGTTCAAGAACTGATTGGATCATGCATGAATATCGCCTCACTTCCTCTCACTCCAACCCCTTGAATGAAAATTGGGTTATGTGTCGCATATTTTTGAAGGGGAGAAGTGAGGTGAAGAGGAAGAACTCAACTTCAAGTTCAAAAGTGGTTGTTTTCTATGATTTCTTCGCAGAGAAGAAGAACAATACTGATGCATCCTCCTCCTAA 522 0.3966 MQVDKMPAKISEQGSEEDDSKRSNISNGLCISSSMCVVLLGDMEQERYFFSTKEAKYPNGN*SNRARKSGYWKETGLDKQIMNSKTREVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLTSSHSNPLNENWVMCRIFLKGRSEVKRKNSTSSSKVVVFYDFFAEKKNNTDASSS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1705 172 MobiDBLite consensus disorder prediction 1 24 - -
Mtr7g1705 172 Gene3D NAC domain 30 142 IPR036093 GO:0003677|GO:0006355
Mtr7g1705 172 Pfam No apical meristem (NAM) protein 44 117 IPR003441 GO:0003677|GO:0006355
Mtr7g1705 172 SUPERFAMILY NAC domain 44 137 IPR036093 GO:0003677|GO:0006355
Mtr7g1705 172 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 37 167 - -
Mtr7g1705 172 ProSiteProfiles NAC domain profile. 1 137 IPR003441 GO:0003677|GO:0006355
Mtr7g1705 172 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 37 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1705 Mtr-Chr7 32627258 32629412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1705 39 140 NAC Transcription Factor Family AT5G13180 67.619 1.88e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g1705 NAM 4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1705 - - gmx:100170709 186.422