Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1696 ATGTCCGAGAGAATTTTCATTGGAAATGATGAGGATAGAAACCTCAAACGCAAAATGGTAGAGGTGCCAAAATTAGAGTCGAAATCAAAGAAGGAGTCAAAGATAATGCCACCAACCTCTGAATCTCATGTTGAGGATTTTCTGACCCTAAGACTTGGCACTCACACCAAGTCCACTTCCAAACCCTTGGAGAATGGTGGACATTCAAGTTCATTTCAAAACACTCTTGATGAACCTTTACCTGAGCAGAAAGTGGTAGAGTTCTCTTGTAATTATTGTGACAAGAAATTCTCCACTTCTCAAGCTCTTGGAGGTCACCAAAATGCTCATAAGCGTGAACGTGTCTTGAAAAAAATGGAAGATAGAAGGAGAGAGGAAGAGATGGATTTAACCCTAAGGTTTTCAAGCTTTATTCACTATCAAGGCCATTCATATTTCCGTAGTGCTAACTTGCACAACCCAATTGGCGTCCATGTGACGAATGCCTTTCCTTCTTGGATCGGTTCACCTTATGGTGGCTATGGAGGGGTGTATATGCCAAATACACCCCTTGCAACCCGGTATGTGATGCAAATGCCAAATTCACCCCAAGCAACACCACAATTTGGGATGACTAATTTTTGGGGTGGAGGTCTAAATGCTTCATTACCAATTCCACAAAGGTCAAATACTTTGGGTTTGGGACTTTTTCCTCAAAGAAATTTCATTGATCAACTTCATTCTCATACTCTTCCATTATCGTCTCGTGATCCTAATAGAGAAGGCTTAATTCAGGCAAATCCCAATATGTCCTCATCATCAACTCAATCAACCTAG 816 0.4105 MSERIFIGNDEDRNLKRKMVEVPKLESKSKKESKIMPPTSESHVEDFLTLRLGTHTKSTSKPLENGGHSSSFQNTLDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQGHSYFRSANLHNPIGVHVTNAFPSWIGSPYGGYGGVYMPNTPLATRYVMQMPNSPQATPQFGMTNFWGGGLNASLPIPQRSNTLGLGLFPQRNFIDQLHSHTLPLSSRDPNREGLIQANPNMSSSSTQST* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1696 271 Gene3D Classic Zinc Finger 68 137 - -
Mtr7g1696 271 MobiDBLite consensus disorder prediction 18 39 - -
Mtr7g1696 271 SUPERFAMILY beta-beta-alpha zinc fingers 88 116 IPR036236 -
Mtr7g1696 271 MobiDBLite consensus disorder prediction 243 271 - -
Mtr7g1696 271 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Mtr7g1696 271 MobiDBLite consensus disorder prediction 57 76 - -
Mtr7g1696 271 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 58 155 IPR044246 GO:0009788
Mtr7g1696 271 Pfam C2H2-type zinc finger 88 112 - -
Mtr7g1696 271 MobiDBLite consensus disorder prediction 18 42 - -
Mtr7g1696 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1696 Mtr-Chr7 32549878 32550693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1696 82 178 C2H2 Transcription Factor Family AT5G25160 43.000 6.60e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g1696 zf-C2H2_6 8.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1696 - - cam:101490368 217.624