Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1695 ATGTCTGAGAGAATTTCCATTGGAAATGATGAGGATAGAAACCTCAAACGCAAAATGGTAGAGGAGCCAAAATTGGAGTTGAAATCAAAGAAGGAGTCAAAGATAATGCCACCAACCTCTGAATCTCATGTTGAGGATTTTCTGACCCTAAGACTTGGCACTCACACCAAGTCCACTTCCAAACCCTTGGAGAATGGTGGACTTTCAAGTTCATTTCAAAACCCTACTGATGAACCTTTACCTGAGCAGAAAGTGGTAGAGTTCTCTTGTAATTATTGTGACAAGAAATTCTCCACTTCTCAAGCTCTTGGAGGTCACCAAAATGCTCATAAGCGTGAACGTATCTTGAAAAAAATGGAAGATAAAAAGAGAGAGGAAGAGATGGATTCAACCCTATGGTTTTCAAGCTCTATTCACTATCAAGGCCATTCATATTTCCGTAGTGCTAACTTGCACAACCCAAATGGCGTCCATGTGACCAATGCCTTTCCTTATGGTGGCTATGGAGGGGTGTATATGCCAAATACACCCCTTGCAACCCGGTATGTGATGCAAATGCCAAATTCACCCCAAGCAACACCACAATTTGGGATGACTAATTTTTGGGGTGGAGGTCTAAATGCTGCATTGCCAATTCCACAAAGGTCAAACACTTTGGGTTTGGGACTTTTTCCTCAAAGAAATTTCATTGATCAACTTCTTTCTCATACTCTTCCATTATCATCTCGTGATCCTAAAAGAGAAGGCATAATTCAGGCAAATCCCAATGTGTCCTCATCATCAACTCAATCAACCTAG 798 0.4123 MSERISIGNDEDRNLKRKMVEEPKLELKSKKESKIMPPTSESHVEDFLTLRLGTHTKSTSKPLENGGLSSSFQNPTDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERILKKMEDKKREEEMDSTLWFSSSIHYQGHSYFRSANLHNPNGVHVTNAFPYGGYGGVYMPNTPLATRYVMQMPNSPQATPQFGMTNFWGGGLNAALPIPQRSNTLGLGLFPQRNFIDQLLSHTLPLSSRDPKREGIIQANPNVSSSSTQST* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1695 265 Gene3D Classic Zinc Finger 72 141 - -
Mtr7g1695 265 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Mtr7g1695 265 MobiDBLite consensus disorder prediction 57 78 - -
Mtr7g1695 265 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Mtr7g1695 265 SUPERFAMILY beta-beta-alpha zinc fingers 88 116 IPR036236 -
Mtr7g1695 265 MobiDBLite consensus disorder prediction 241 265 - -
Mtr7g1695 265 Pfam C2H2-type zinc finger 88 112 - -
Mtr7g1695 265 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 21 152 IPR044246 GO:0009788
Mtr7g1695 265 MobiDBLite consensus disorder prediction 1 39 - -
Mtr7g1695 265 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1695 Mtr-Chr7 32544314 32545111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1695 63 179 C2H2 Transcription Factor Family AT5G10970 37.903 8.35e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g1695 zf-C2H2_6 8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1695 - - cam:101490368 211.846