Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1688 ATGGAGTGTAACACTATCTCTTATTCTTATGGGTCATGTTCAAAGAGAAAGGAGAAAAAAGGTGTGAAAAAATCCAAAGGAAGTTCAGTGAAACTTTCAACTGATCCACAAAGTGTTGCAGCTAGAGAAAGAAGACATAGAATCAGTGATAGGTTCAAGATTCTTCAGAGTATGATCCCTGGTGGAAGTAAATTAGATACTGTTTCTATGTTGGAGGAAGCTATTCATTATGTTAAGTTTCTTAAGAAACAGATTTGGCTTCATGAAACATTGATTAACTTTGTTGATGATATTGGTGAGTCACACATGTTGCTTCCTCAAGATTATTCTTCAAATGATAAAAATATTCCTTCAGGTACATTTGAGTCTATGCAGAATTTGCCACAGTTACCACTAGAGCAGTTTTGTTTTCAAGGAGATAAAGATATCAAAACCATCTTTGATGCCACTATGAAATATTAA 462 0.3398 MECNTISYSYGSCSKRKEKKGVKKSKGSSVKLSTDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQIWLHETLINFVDDIGESHMLLPQDYSSNDKNIPSGTFESMQNLPQLPLEQFCFQGDKDIKTIFDATMKY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1688 153 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 37 92 IPR036638 GO:0046983
Mtr7g1688 153 MobiDBLite consensus disorder prediction 19 43 - -
Mtr7g1688 153 Pfam Helix-loop-helix DNA-binding domain 42 81 IPR011598 GO:0046983
Mtr7g1688 153 CDD bHLH_AtIND_like 33 92 - -
Mtr7g1688 153 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 15 109 - -
Mtr7g1688 153 SMART finulus 38 87 IPR011598 GO:0046983
Mtr7g1688 153 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 32 81 IPR011598 GO:0046983
Mtr7g1688 153 Gene3D - 35 97 IPR036638 GO:0046983
Mtr7g1688 153 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 109 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1688 Mtr-Chr7 32420152 32421143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1688 22 109 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 47.727 8.18e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g1688 HLH 1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1688 - - gra:105779443 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1688 7 32420152 32421143 Mtr7g1688 7 32420152 32421143 ECH