Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1682 ATGACCCTTTCAGCCACCACATTGATCGTCACCTTCGCCGCCTTGTGTTTCCTTTTACAATCCGAAGCCAAAACAATCGACCCGTACAAGGTTCTCGGGGTTGATAAAAGTGCTAGTCAACGAGAAATTCAGAAGGCTTTTCACAAACTCTCTCTACAATATCACCCTGACAAGAACAAGGCTAAGGGTGCACAAGAGAAGTTTGCTCAGATAAATAATGCATACGAGATTTTATCAGATGAACAAAAGAGGAAGAATTATGACTTATATGGAGATGAGAAAGGAAATCCTGGATTTGAAGCTGGTCATCCGGGAGGTTACGGTGGTCCTGGTGGATTTAACTTCAGACCAGGGGAACAACAATGGGGTAGGGGTGACCAGGGAGGCTCTAAGTCATTCTCCTTTTCCTTTGGCGGCGGCTCTGGTGATTCAAATTCTTTTGGATTTGGTTTGGATGATCTTCTTGGAAACTTTTTTGGTGATTTTGGCAGTTCATTTAGGTCTCAATCATCTCAATCTGGGTCCAAGAGTTCCCCCAAAAGTTTTAAGGCCATAAATTCAAATATCTATAACAAAGAAATAGTCGATGAAGGAATGACTTGGCTTTTGTTATCTTATTCACCCTCTTTGAGGGGCATCCAACACTTTGAGTCCATTATAGGGGAGGTTGCTGGTACACTGCAAGGAGCTTTGAAGGTTGGAAGCATTAACTGTGAAAAGGAAGTCTCATTCTGTAAGGAGCTCGGCGTATATCCGCGCAAAGGTCCAAGGCTTTTTGTTTATTCTTACAAAGAGAATGAAAAGGGTTCTCTGGTGGAGTACGGCGGTGACTTGGCTGTCAAGGATTTGAAAGCTTTCTGTCAACAACACTTACCAATGTTTTCAAAACGGACTGACTTGAATCAACTTGATCAATTTAGCACTGCTGAAAAGTTACCTAGGGTGCTGCTTCTCTCAACCAAAAAGAACACTCCTGTAATTTGGCGTGTTCTTAGTGGCTTGTATCGCAAACGCTTTGCCTTCAGTGATGTACAGGTTCATGATGATTCTGATTCGCGAGTGAGAAAGCTAGGTGTTGATGCACTTCCAGCTATTCTAGGTTGGCTACCTAATGGAGAAAAGCTCATTCTGAAAACGGGGGTTTCTGTGAAAGATGTAAAATCTGGTGTACAAGATCTTAGTAAGATACTGGATAGTTTTGAGAAAGTAAGTAAAAAGGAAACATCAAGTCAGTCCAAGAAAGAACAAGCTGATTCAGAAGACAAACACATTCAGTTGCTTTCTCGGACAAACTTTGAGGCTCTTTGTGGGGAGAGAACTCCAGTATGCGTAATTGGTGCCTTTAGATCTTCCAAAGGAAGGGAAAAGCTAGAATCACTTCTCACTTTGGTCTCACAGAAGTCCTTGTCAAGAAAACCAAATGGAAGCGGCAGCTCTAAGGACTCCATTTCCTATGGTCTCTTAGATTCTTCAAAGCAACAATCCTTTCTAAATGCATTTGACAAAACAGGTTATAAATCATCAGATAAGTTATTGATTGCCTACAAACCTCGGAAAGGGAAATTCACTGTATTTACAGGTGAAATGACCGTAGAGGAAGTAGAGAATTTTATCAGCTCCGTTCTAAGCGGAGATATACCATTTAGGGAAACACATAAGAAGCCTGTACTCAAATAG 1677 0.4156 MTLSATTLIVTFAALCFLLQSEAKTIDPYKVLGVDKSASQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEILSDEQKRKNYDLYGDEKGNPGFEAGHPGGYGGPGGFNFRPGEQQWGRGDQGGSKSFSFSFGGGSGDSNSFGFGLDDLLGNFFGDFGSSFRSQSSQSGSKSSPKSFKAINSNIYNKEIVDEGMTWLLLSYSPSLRGIQHFESIIGEVAGTLQGALKVGSINCEKEVSFCKELGVYPRKGPRLFVYSYKENEKGSLVEYGGDLAVKDLKAFCQQHLPMFSKRTDLNQLDQFSTAEKLPRVLLLSTKKNTPVIWRVLSGLYRKRFAFSDVQVHDDSDSRVRKLGVDALPAILGWLPNGEKLILKTGVSVKDVKSGVQDLSKILDSFEKVSKKETSSQSKKEQADSEDKHIQLLSRTNFEALCGERTPVCVIGAFRSSKGREKLESLLTLVSQKSLSRKPNGSGSSKDSISYGLLDSSKQQSFLNAFDKTGYKSSDKLLIAYKPRKGKFTVFTGEMTVEEVENFISSVLSGDIPFRETHKKPVLK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1682 558 Coils Coil 61 81 - -
Mtr7g1682 558 SUPERFAMILY Thioredoxin-like 423 547 IPR036249 -
Mtr7g1682 558 SUPERFAMILY Chaperone J-domain 23 116 IPR036869 -
Mtr7g1682 558 CDD DnaJ 27 80 IPR001623 -
Mtr7g1682 558 PRINTS DnaJ domain signature 29 47 IPR001623 -
Mtr7g1682 558 PRINTS DnaJ domain signature 47 62 IPR001623 -
Mtr7g1682 558 PRINTS DnaJ domain signature 63 83 IPR001623 -
Mtr7g1682 558 PRINTS DnaJ domain signature 83 102 IPR001623 -
Mtr7g1682 558 PANTHER DNAJ PROTEIN ERDJ3A 7 558 - -
Mtr7g1682 558 PANTHER DNAJ PROTEIN ERDJ3A 7 558 - -
Mtr7g1682 558 Gene3D DnaJ domain 24 168 IPR036869 -
Mtr7g1682 558 SUPERFAMILY Thioredoxin-like 183 291 IPR036249 -
Mtr7g1682 558 ProSiteProfiles dnaJ domain profile. 27 91 IPR001623 -
Mtr7g1682 558 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Mtr7g1682 558 SMART dnaj_3 26 83 IPR001623 -
Mtr7g1682 558 Pfam DnaJ domain 27 88 IPR001623 -
Mtr7g1682 558 Gene3D Glutaredoxin 183 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1682 Mtr-Chr7 32370439 32374064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1682 29 90 C2H2 Transcription Factor Family AT1G74250 42.647 2.20e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1682 - - gmx:100796871 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1682 7 32370439 32374064 Mtr7g1682 7 32370439 32374064 ECH