Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1649 ATGGAAGAACCGAATTCCGCCACCGTAACTTCTTCATCTTCCACGGCCAACGGCGAAACTTCTCAACCAAACGAAAATGCTCAAGTCTCACCGAACCGTCCACGTGAGTCTCCGCGCGTGAGCATCATCTACGGGAGATTTGCGCGGCGTATCAACGGTCATTCCGCCATTGCTAGGGATGATAACTGCTCTTGCTTAGCCGTTACCTTCTGCTTTTGGTTCTTCGTTGCGGTGATAATGGTAATGGGGGTTTATGGGTCGATGAGTGTGGTTCTAGGTCCATGTTCTTCACTCATCTTGCAACCTAACCCTATGTTTGTGCAATATGTGAAGGTAGAAAACTTAAAGGCAAATCCAGGACTCATTCTTTATGGTACACATCAAGATCCACCTCTTGATGTTGTTTCCACTTGGAGCGAAACCCATAATATGTCTATTCCTTATGGCTCAGTTAAGGAATGGAAATATTATCTGAATAGAGGGTCTGAAGTAAATATTTCGTATAGCTTGAGCTCTGAGAACTCCTCTCTTTATCTTGTAATTGCAGAAGGAGCTCAAAGCCTCTCACTATGGCTGCAGGACCTAACATATCCCAATACAACTTTGTCTTGGAATGTGATCCGTGGAACTGGTGTGATTACACAGAAAATATTCAGGTCATCCAGCTATTACGTGGCATTGGGTAATTTGGAAGAGGAGGTGAAGGTTGAATTAAACCTCACTGTAAGGGCCTTCTTGCATAATACAACAAAAGCTTACTACAAATGTGCCTTGACTGGTAGTCCATGCAGTATGAATATCTTCTTTCCTCACGGAAGCACAGCTGTGTTAGTTTCTCCTGCTCCACAACAGAACACATCCAATGATGAGTGGTATGTCAAACTGACCTATGGACCAAGATGGCTTACATATATTATTGGCATAGGTATTCTGACTTTGATTATGTTTTGGGCCTTCAACTTCTTCAACAAGCTTCAATGTTCACATGATGATAGAGTAGGATCTAGATCTGAAGGAACAGGACCTGATCGAGCCCCTTTCCTTTCTCGCAAAGATGATCTTTCAAGGGGTTCATCATATGATTCCTTACCAGAGGATGATGAGGATCTTAACTTTGTCGCCGGAGGTTCCACTGATGGGAAGATATTAGGTGATGGTGAAACCAGTAATAACACCCAGCGTCTTTGTGCGATTTGTTTTGATGCTCCACGAGACTGCTTCTTCCTTCCATGTGGGCACTGCGTGGCTTGTTTTGCATGTGGATCTAGGATAGCCGAGGCAGCAGGTATATGTCCTGTTTGTCGTAGGAACATGAAGAAGGTGAGGAGAATTTTTACTGTTTGA 1344 0.4382 MEEPNSATVTSSSSTANGETSQPNENAQVSPNRPRESPRVSIIYGRFARRINGHSAIARDDNCSCLAVTFCFWFFVAVIMVMGVYGSMSVVLGPCSSLILQPNPMFVQYVKVENLKANPGLILYGTHQDPPLDVVSTWSETHNMSIPYGSVKEWKYYLNRGSEVNISYSLSSENSSLYLVIAEGAQSLSLWLQDLTYPNTTLSWNVIRGTGVITQKIFRSSSYYVALGNLEEEVKVELNLTVRAFLHNTTKAYYKCALTGSPCSMNIFFPHGSTAVLVSPAPQQNTSNDEWYVKLTYGPRWLTYIIGIGILTLIMFWAFNFFNKLQCSHDDRVGSRSEGTGPDRAPFLSRKDDLSRGSSYDSLPEDDEDLNFVAGGSTDGKILGDGETSNNTQRLCAICFDAPRDCFFLPCGHCVACFACGSRIAEAAGICPVCRRNMKKVRRIFTV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1649 447 PANTHER OS05G0521000 PROTEIN 7 447 IPR044586 GO:0004842
Mtr7g1649 447 MobiDBLite consensus disorder prediction 1 35 - -
Mtr7g1649 447 Pfam Domain of unknown function (DUF4792) 120 188 IPR032008 -
Mtr7g1649 447 MobiDBLite consensus disorder prediction 1 37 - -
Mtr7g1649 447 SMART ring_2 396 434 IPR001841 -
Mtr7g1649 447 MobiDBLite consensus disorder prediction 345 363 - -
Mtr7g1649 447 PANTHER E3 UBIQUITIN-PROTEIN LIGASE APD1-RELATED 7 447 - -
Mtr7g1649 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 383 447 IPR013083 -
Mtr7g1649 447 Pfam Zinc finger, C3HC4 type (RING finger) 393 441 - -
Mtr7g1649 447 ProSiteProfiles Zinc finger RING-type profile. 396 435 IPR001841 -
Mtr7g1649 447 SUPERFAMILY RING/U-box 395 441 - -
Mtr7g1649 447 MobiDBLite consensus disorder prediction 333 367 - -
Mtr7g1649 447 Pfam Domain of unknown function (DUF4793) 213 317 IPR032010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1649 Mtr-Chr7 31939683 31946516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1649 369 444 C3H Transcription Factor Family AT3G06140 28.947 2.29e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1649 - - gmx:100791057 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1649 7 31939683 31946516 Mtr7g1649 7 31939683 31946516 ECH