Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1641 ATGGAGGGTTCTGAATGTCAAGCAGTTGAAATTGACAAGCCCAGAGATATTTTTCTTGGTCAAGTTGTGCAGAGCAAGGATGAAGCTTATAACTTATACCAAGAACATGGCTTCAAGATGGGTTTTAGTGTAAGAAAAGGGAAGGAATTGTACTATGATAATGATAAAAAGAACACACGTTTGAAAGATTATTATTGTTCCAAACAAGGGTTTAAGAACAATGAACCAGAAGGAGAAATCGTAGGTGAAGTTGCTTATCAAAGGGCTGATTCAAGGACAAATTGTAAAGCAATGGTGCGATTTAATGTTAGCAAGGATGGAGAATGGCGAATTACTAAGTTGATAATGGATCACAACCATGCTTTGGTACCGCTTGAGCAAAGACATTTGTTACGCTCTATGAGAAAAGTATCAGAAACCAAAGGAGGTCTCATAAAGTCTATGGTTAATGCTGGTATGAAAGTTACTCATGTTTGGAGTTATTTAGGAGAAGAGGTTGGTGGATTTGATAAGCTTGGCATGACAATGAAAGATGTGCATAATTTTGTCTACACTGAAAAGAGTAAATTAATTAAAGGTGGAGATGCCCAATCTTTAATCAATCACTTGCAAAATAGACAAGCACAAGATGCCATGTTCTACTATAGTGTGCAGTTAGACCAAGAATCACGTTTAACCAATGTGTTTTGGAGAGATGGTAAATCCAAAGTTGATTATGATTGTTTTGGAGATGTTGTGGTTTTTGATACCACTTACCGTACTAATACATATGATTTGATATGTGCTCCTTTTGTTGGGGTAAATCATCATTTGCAAAATGTTATGTTTGGTTGTGCTTTGTTATCTGATGAAACTTCTGTTTCTTTTAATTGGCTATTTAAAGTGTTTTTGGAGAGCATGGGAAATAGACAACCAAAAACATTTTTTACAGATCAAGATGGAGCCATGGCCAAAGCAATCGGAGACGTAATGCCAAATACATGTCACCGTTTATGCTTATGGCATATATCTAAGAATGCACCTTCTCATTTTGGTGATCTTAAATCTGATCAAAAGTTTCAAGGTTTGTTTTGGAAATGCATGTCAGGCTGTGATTCAAAAGAAGAGTTTGAAAGCACTTGGAGTTATATGATTAATGAGTACAAGCTTCAAAATCACAAGTGGTTGAAAAGCATGTATAAAATTCGCCATAAATGGAGCACTGCATATAGCAAGGATGTGTTCTCTGCTGATATCAAGTCATCTCAAAGAAGTGAGAGTACAAATAGTGTTTTAAGTGCGATTGCCGGAGCAACAACCAGTCTCAGTCATTTCTTATTAGCATTTGAAAAAATGGTAAACAAGTGGCGACAATTAGAGACTGAAAAGGAATTCAAAAATAGCCAAAGTATGCCTCCCCGCATCATTAATATCAGTGAGACTTTGAGACAAGCATCTATGATATACACTCACAAGACTTTCAAACTTTTTTTGAATGAGTATCTTGCTGGAACGGGTGGAAGTACTTCTAAAGACATTGGAGAATCTGATAATTTGTCATATCATGAAGTGAGTTCAAATCATATGCCTAATAAGAAACATATGGTAGTATTTGACTCCTCTGCTGCAAAGATCAGTTGTAGTTGTCGAAAGTTTGATTCAATGGGCATTCTTTGTAGTCATGCTTTGCGAATTTACAACATCAAAGGTATATTAAAAATACCTGACCAATACTTTCTGAGAAGATGGTCAAAAAAAGCAAGGGCTGTGATTTATGATCACATAGATGAGAGTTCAAAAGAAAATTCTATCTCAGAAAATGCAATGAACAATGGTGGTGATTCCATGATCCTTTATCGCAATGCTATTATGAAGTTTTTTTATAATCTAGTTTTGGATAGCCAGGAACACAAAGAAACTCAACAAATCATGTGGAAATTGGTTTATGGTGGAGTTAAGAGTGTGCACCAATGCATCAATGAGCTCAGTTTGATTTCAAAAGCAACAACTAGTGAGAAAAAATTCACTCAAAATGAGGATAGTGATCACATTGCAATTTATAATCCTCGCCGCGCAAAAACTAAAGGAATGTCTAATACTCGCATGAAAGGGCATTTTGAAAAAAGAAAAGGATCAACAACAAAAGAAAAGCAACATAAAAGTGAGTTTCTTGATTATTTTTTAAGTATACTTTCATCATTTATTGAACATGTTTAA 2196 0.352 MEGSECQAVEIDKPRDIFLGQVVQSKDEAYNLYQEHGFKMGFSVRKGKELYYDNDKKNTRLKDYYCSKQGFKNNEPEGEIVGEVAYQRADSRTNCKAMVRFNVSKDGEWRITKLIMDHNHALVPLEQRHLLRSMRKVSETKGGLIKSMVNAGMKVTHVWSYLGEEVGGFDKLGMTMKDVHNFVYTEKSKLIKGGDAQSLINHLQNRQAQDAMFYYSVQLDQESRLTNVFWRDGKSKVDYDCFGDVVVFDTTYRTNTYDLICAPFVGVNHHLQNVMFGCALLSDETSVSFNWLFKVFLESMGNRQPKTFFTDQDGAMAKAIGDVMPNTCHRLCLWHISKNAPSHFGDLKSDQKFQGLFWKCMSGCDSKEEFESTWSYMINEYKLQNHKWLKSMYKIRHKWSTAYSKDVFSADIKSSQRSESTNSVLSAIAGATTSLSHFLLAFEKMVNKWRQLETEKEFKNSQSMPPRIINISETLRQASMIYTHKTFKLFLNEYLAGTGGSTSKDIGESDNLSYHEVSSNHMPNKKHMVVFDSSAAKISCSCRKFDSMGILCSHALRIYNIKGILKIPDQYFLRRWSKKARAVIYDHIDESSKENSISENAMNNGGDSMILYRNAIMKFFYNLVLDSQEHKETQQIMWKLVYGGVKSVHQCINELSLISKATTSEKKFTQNEDSDHIAIYNPRRAKTKGMSNTRMKGHFEKRKGSTTKEKQHKSEFLDYFLSILSSFIEHV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1641 731 Pfam MULE transposase domain 245 339 IPR018289 -
Mtr7g1641 731 Pfam FAR1 DNA-binding domain 32 124 IPR004330 -
Mtr7g1641 731 PANTHER OS12G0160900 PROTEIN 17 671 - -
Mtr7g1641 731 Pfam SWIM zinc finger 533 558 IPR007527 GO:0008270
Mtr7g1641 731 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 671 IPR031052 GO:0006355
Mtr7g1641 731 SMART 26again6 538 565 IPR006564 GO:0008270
Mtr7g1641 731 ProSiteProfiles Zinc finger SWIM-type profile. 527 563 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1641 Mtr-Chr7 31838316 31841935 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr7g1641 MULE 1.1e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1641 - - lja:Lj4g3v2120630.1 1075.08