Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1640 ATGGGTTCTCGTCAAATTCAACAAGAACAACCATGGCTGTTGGAGAATGGTAATCCAAAGGTCTTGACCAAGGAAGCTAGACATGGACATGGCCGGAGCCGGACCGCGCATGGCATGTCTTCTTCTTCCTTGCGCAAGAAATCTGATCACGCTCTTGTGTCAAGGATTCGATGTGCTTCGCTCCGGAACGTTTTGGTTAACATCCAAGAGGTTATTCTTGGTACCAAGCTGTCCATTCTCTTCCCTGCCATTCCTGCTGCCATTGTTGCTCACTACCTTGGCTTAGGAAGACCATGGGTTTTCATACTGAGCTTACTTGGCCTCACTCCACTTGCTGAACGTGTGAGCTTTCTCACAGAACAAATTGCCTTCTTCACTGGTCCTACAGTTGGAGGACTTCTTAATGCAACATGTGGGAATATTACTGAGCTGATCATAGCAATATTTGCTCTTAGCAGCAACCAAATTGCTGTTGTCAAGTATTCTCTTTTAGGTTCCATCCTTTCAAACCTTCTTCTTGTGCTTGGAACCTCTCTACTTTGTGGTGGCATTGCTAACCTTGGAGTTGAGCAAAAATATGACAGAAGACAAGCAGACGTGAATTCACTAATGCTGCTTTTGGCATTGTTATGCCATTTGCTTCCATTGCTATTCACATTCAGTGCTGCATCACCCGAACTCACAGTAGAGCCTTCACTCTACTTGTCAAGATCTGCTAGCATTGTGATGTTGGCTGCATATTTTGCTTACTTGATCTTTCAACTATGGACACACAGGCAATTATTTGAAGCTGAAGATGAAGGTGAAGGTGAGAGCAATGAGGCAGAAGAAGAAGCTGTGATTGGATTTTGGAGTAGCTTTGGTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTATCTGAATATGTGGTTGATACAATTCAGGATGCATCAGATTCATGGGGTTTGTCTGTCAGTTTCCTCAGCATAATCTTGTTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCATTCAAGAACAAGCTGGACATTTCCTTAGGTGTTGCATTGGGCTCTGCTACTCAAATTTCAATGTTTGCGGTTCCTCTATGTGTGATTGTTGCATGGATAATGGGTGTGAAAATGGACTTGAACTTCAACCTCCTTGAGACAGGTTCTCTTGCTTTGGCAATTATAGTCACAGGCTTCACTTTACAGGATGGTACTTCTCACTACTTGAAAGGCCTTATTCTCCTACTTTGCTACTTTGTTATTGGTGCTTGCTTCTTTGTGCAAAGAACACCCAATGACCCAAATGGTGTTAATAACATCACAATTAAATCAGTCACTGATTCAGTTTTAAGTGCCTAA 1368 0.4284 MGSRQIQQEQPWLLENGNPKVLTKEARHGHGRSRTAHGMSSSSLRKKSDHALVSRIRCASLRNVLVNIQEVILGTKLSILFPAIPAAIVAHYLGLGRPWVFILSLLGLTPLAERVSFLTEQIAFFTGPTVGGLLNATCGNITELIIAIFALSSNQIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLGVEQKYDRRQADVNSLMLLLALLCHLLPLLFTFSAASPELTVEPSLYLSRSASIVMLAAYFAYLIFQLWTHRQLFEAEDEGEGESNEAEEEAVIGFWSSFGWLAGMTVFIALLSEYVVDTIQDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFAVPLCVIVAWIMGVKMDLNFNLLETGSLALAIIVTGFTLQDGTSHYLKGLILLLCYFVIGACFFVQRTPNDPNGVNNITIKSVTDSVLSA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1640 455 TIGRFAM cax: calcium/proton exchanger 83 429 IPR004798 GO:0006816|GO:0015369
Mtr7g1640 455 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 7 438 IPR004713 GO:0006812|GO:0008324|GO:0016021
Mtr7g1640 455 TIGRFAM caca2: calcium/proton exchanger 63 429 - -
Mtr7g1640 455 Gene3D - 279 429 IPR044880 -
Mtr7g1640 455 Gene3D - 128 278 IPR044880 -
Mtr7g1640 455 Pfam Sodium/calcium exchanger protein 286 424 IPR004837 GO:0016021|GO:0055085
Mtr7g1640 455 Pfam Sodium/calcium exchanger protein 99 256 IPR004837 GO:0016021|GO:0055085
Mtr7g1640 455 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 7 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1640 Mtr-Chr7 31822602 31826741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1640 10 435 Antiporters AT2G38170 67.749 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1640 K07300 - gmx:100779440 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1640 7 31822602 31826741 Mtr7g1640 7 31822602 31826741 ECH
Mtr7g1640 7 31822602 31826741 Mtr4g0435 4 5410242 5415180 PCT