Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1635 ATGGGGTTTATTCTCAAAAGAAGAAAGAAGGAAATAGAAGAAAAAGGAACAATAGAGATCATGCGAAAGTCTTTCAAGGATTCTCTCAAAGCTCTTGAAGCTGATATTCAATTTGCTAATACACTAGCTTCGGATTGTCCAAGTGATCAGGATGGTGCCTACCTTCAAATGAGATTGTCCTACAGCCCAGCTGCACACTTCTTCCTCTTTTTGGTTCAGTGGACTGACTGTCACCTTGCCGGGGCCTTAGGATTGCTTAAAATTTTCATATACAAGGCATATAAGGATGGGAAGACAACCATGTCTATTCATGAAAGAAAAGCAAGTTTGAAGGAGTTCTATGGTGTGGTGTTTCCCTCTTTATTGCAACTTCACAGAGGAATCACTGATGTTGAGGATAGGAAACAAAAACTTCTGTGTGCTACTAAGTACAAGCCTAAAGAATTAGTAGACAAGGGAAAGAGCTCCGAAATTGACGTAGAGAAAGAAGAAGAAGAGTGTGATATTTGCATGGAGATTACCAGTATAGTTGTATTGCCCAATTGCAATCATTCAATGTGTATCAAATGCTACCGAGACTGGCATGCAAGATCGGAATCCTGCCCTTTCTGTCGGGACAGTCTTAAAAGAGTAAACTCAGGTGACCTATGGATGTACATGAGCAGCAGTGAGATAGATGATCTTGCTTCAATCAACAAGGAGAATTTGAAAAGACTATTTATGTACATAGAAAAGTTGCCTCTTGTTGCTAGACCCTATATTCACATGGTATCATCACAACTTGTGGTTGCCTCTTAG 798 0.3997 MGFILKRRKKEIEEKGTIEIMRKSFKDSLKALEADIQFANTLASDCPSDQDGAYLQMRLSYSPAAHFFLFLVQWTDCHLAGALGLLKIFIYKAYKDGKTTMSIHERKASLKEFYGVVFPSLLQLHRGITDVEDRKQKLLCATKYKPKELVDKGKSSEIDVEKEEEECDICMEITSIVVLPNCNHSMCIKCYRDWHARSESCPFCRDSLKRVNSGDLWMYMSSSEIDDLASINKENLKRLFMYIEKLPLVARPYIHMVSSQLVVAS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1635 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 213 IPR013083 -
Mtr7g1635 265 PANTHER RING FINGER PROTEIN 41, 151 18 264 - -
Mtr7g1635 265 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 18 264 - -
Mtr7g1635 265 Pfam Zinc finger, C3HC4 type (RING finger) 163 210 - -
Mtr7g1635 265 SUPERFAMILY RING/U-box 161 210 - -
Mtr7g1635 265 SMART ring_2 167 204 IPR001841 -
Mtr7g1635 265 ProSiteProfiles Zinc finger RING-type profile. 167 205 IPR001841 -
Mtr7g1635 265 ProSitePatterns Zinc finger RING-type signature. 182 191 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1635 Mtr-Chr7 31775604 31779067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1635 110 209 C3H Transcription Factor Family AT5G01960 30.769 6.02e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1635 K25840 - gmx:100814293 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1635 7 31775604 31779067 Mtr7g1635 7 31775604 31779067 ECH