Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1634 ATGACAAAGGGCAAGGGAACAGCAAAGACTTCAAGGGATGCTTTGAAACCAGTTGATGATCGAAAAGTAGGAAAGAGAAAGGCTGCTGCTAAACCTGAGAAGGTGCCAAAGACTAAGAAGGAGAAGAAGGCCAAGAAAGATCCCAACAAACCAAAAAGACCTCCCAGCGCTTTCTTCGTCTTCCTTGAGGATTTCAGAAAGACTTTCAAGGCAGAGAACCCTAATGTGAAGGCTGTATCAGCTGTTGGAAAGGCTGGAGGAGAGAAATGGAAATCCTTGACTAAGGCGGAAAAAGCTCCATATGAAGCCAAGGCTGCAAAAAGGAAAGTTGAGTATGAAAAGCTTATGAATGCTTATAATAACAAGCCAAGTTCAGCGGACGATGACGAGGAGGAATCAGACAAGGACAATTCTGAAGTTAATAATGAAGATGAAGCAAGTGGAGAGGATGACCACCAAGATGACGAGGAAGAGGATGACGAGGACGAAGATGACGATGAAGACGACGAGTGA 513 0.4444 MTKGKGTAKTSRDALKPVDDRKVGKRKAAAKPEKVPKTKKEKKAKKDPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKVEYEKLMNAYNNKPSSADDDEEESDKDNSEVNNEDEASGEDDHQDDEEEDDEDEDDDEDDE* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1634 170 SUPERFAMILY HMG-box 42 125 IPR036910 -
Mtr7g1634 170 PANTHER HIGH MOBILITY GROUP B PROTEIN 1 2 160 - -
Mtr7g1634 170 MobiDBLite consensus disorder prediction 90 105 - -
Mtr7g1634 170 CDD HMGB-UBF_HMG-box 51 116 - -
Mtr7g1634 170 Gene3D High mobility group box domain 34 139 IPR036910 -
Mtr7g1634 170 MobiDBLite consensus disorder prediction 127 170 - -
Mtr7g1634 170 MobiDBLite consensus disorder prediction 1 56 - -
Mtr7g1634 170 Pfam HMG (high mobility group) box 51 120 IPR009071 -
Mtr7g1634 170 SMART hmgende2 50 121 IPR009071 -
Mtr7g1634 170 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 51 120 IPR009071 -
Mtr7g1634 170 MobiDBLite consensus disorder prediction 9 52 - -
Mtr7g1634 170 MobiDBLite consensus disorder prediction 83 105 - -
Mtr7g1634 170 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 2 160 IPR031061 -
Mtr7g1634 170 MobiDBLite consensus disorder prediction 117 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1634 Mtr-Chr7 31771481 31775039 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mtr7g1634 HMG_box 2.6e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1634 K25507 - gmx:100499704 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1634 7 31771481 31775039 Mtr7g1634 7 31771481 31775039 ECH