Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1601 ATGATTTTATCTAGAACAATGAATAGAGGAGTTGAAGTTCTATCACCAGCTTCCTATATCCAAAATTCCAATTGGTTGTTTCAAGAAAACAATGGTTCAAAATGGACTTCAGAAGAGAATAAGCTCTTTGAGAATGCTTTAGCTTATTATGATAAGGATACTCCTGATAGATGGATAAGGGTTGCTGAGATGATTCCTGGAAAAACTGTAGGTGATGTGATTAAACAGTATAGGGAGCTTGAAGAAGATGTGTGTGTTATTGAAGCTGGTTTGATACCAGTTCCTGGTTATACAACTAGTTCTTTTACATTGGATTGGGATAACAGTGAAGGGTATGATGAGTTCAAGCAGTTTTGTAGTGTTGGTGGGAAAAGAAATGGTTCGACTCGGCCGTCGGAGCAGGAAAGAAAGAAAGGTGTGCCATGGACTGAAGAGGAGCATAGACAATTTCTGTTGGGTCTGAAAAAGTATGGCAAGGGAGATTGGAGAAACATCTCTAGGAATTTCGTGACCACAAGGACACCAACTCAAGTCGCAAGTCATGCTCAGAAGTATTTCATTAGGCAGCTTTCAGGAGGGAAGGATAAGAGGAGATCCAGTATCCATGATATCACAGTGGTCAATCTCCAAGAAACGAAATCGCCTTCATCAGAAAGTAACAATCTTTCTTCGCCGGATCATTTGGTCAAGGTTCCAAATCAACCGCAAAATAATAATTTGTCCGGCATGGTCAAGCAGGAATTTGACTGGAAATTACCAGATGAAGGCATGTCATTTGTTTTCAATTCAACTAAAGGAAACATGTTTGTGGCACCGTCGTGCGGGATTTCTTCACATGAATCGAAATCACCGGGGCGTAATGTACTCCGAAGCACTCATCATGGATACCAGTTTTCACCTTTTGATACTATTTTGCAAATGCAATCCATGCAGCATCAATGA 942 0.4045 MILSRTMNRGVEVLSPASYIQNSNWLFQENNGSKWTSEENKLFENALAYYDKDTPDRWIRVAEMIPGKTVGDVIKQYRELEEDVCVIEAGLIPVPGYTTSSFTLDWDNSEGYDEFKQFCSVGGKRNGSTRPSEQERKKGVPWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLSGGKDKRRSSIHDITVVNLQETKSPSSESNNLSSPDHLVKVPNQPQNNNLSGMVKQEFDWKLPDEGMSFVFNSTKGNMFVAPSCGISSHESKSPGRNVLRSTHHGYQFSPFDTILQMQSMQHQ* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1601 313 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 8 289 IPR043363 -
Mtr7g1601 313 Gene3D - 27 94 - -
Mtr7g1601 313 PANTHER MYB TRANSCRIPTION FACTOR MYB51 8 289 - -
Mtr7g1601 313 CDD SANT 141 186 IPR001005 -
Mtr7g1601 313 ProSiteProfiles Myb-like domain profile. 27 81 IPR001005 -
Mtr7g1601 313 SUPERFAMILY Homeodomain-like 33 88 IPR009057 -
Mtr7g1601 313 ProSiteProfiles SANT domain profile. 142 190 IPR017884 -
Mtr7g1601 313 Pfam Myb-like DNA-binding domain 141 186 IPR001005 -
Mtr7g1601 313 Pfam Myb-like DNA-binding domain 33 79 IPR001005 -
Mtr7g1601 313 Gene3D - 140 190 - -
Mtr7g1601 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 190 IPR017930 -
Mtr7g1601 313 MobiDBLite consensus disorder prediction 123 142 - -
Mtr7g1601 313 ProSiteProfiles Myb-like domain profile. 134 186 IPR001005 -
Mtr7g1601 313 CDD SANT 34 80 IPR001005 -
Mtr7g1601 313 SUPERFAMILY Homeodomain-like 135 189 IPR009057 -
Mtr7g1601 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 189 IPR006447 GO:0003677
Mtr7g1601 313 SMART sant 138 188 IPR001005 -
Mtr7g1601 313 SMART sant 31 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1601 Mtr-Chr7 31330233 31333032 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g1601 Myb_DNA-binding 4.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1601 - - var:108329798 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1601 7 31330233 31333032 Mtr5g2785 5 36287442 36289937 ECH
Mtr7g1601 7 31330233 31333032 Mtr7g1601 7 31330233 31333032 ECH
Mtr7g1601 7 31330233 31333032 Mtr5g2351 5 30879598 30882345 ECH
Mtr7g1601 7 31330233 31333032 Mtr3g1632 3 28324567 28327372 ECH