LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g1586	ATGCTTCAGATTCGGCTTAGTAAGAATCCATCCTCTGATGGGTCGGCAGGCGTGAAGCAATCGCCTGTTGAGACTGTTACGGTTGCCTGCCCTGACCATTTGGTCCTTGCTGATCTTCCTGTTGCAAAGGGCATTGGTATAGCTACTGCTTCTTCCGTTGTTAGGAATATTGGTCGCAGATCTCGTCGCCAGCTTGGTGAGCGAGTTCATTTCTGTGTTCGATGTGATTTTCCGATTGCGATTTATGGAAGGCTGAGCCCTTGTGACCATGCTTTCTGTCTCGATTGTGCTAGAAGTGATTCATCGTGCTACCTGTGTGAAGAACGAATCCAGAAGATTCAGACTATCAAAGTGATGGAAGGAATCCTGATATGTGCAGCTCCTCATTGTCTCAAGTCATTCTTGAAGAGAGTTGATTTTGAATCTCATATCCATGAATTCCACGCCGATCTTCTTCGCCCCAATGCAGATAAAGAAGACGGAAATGAGTCAGAAGCACAAAGTGTTAGACAACCTACAGCCTCAGACTCCACTGCTCGAGGCCCCATAAGGCAAGTTTTTTCTCCAGGTTCAAATTCTCAACATGATCTGGAAGACAGAACCCGTCGGCAACCACCAAGAGATCAAGCTCCTTCAAGGCCAGCAATGCAGCAAAAGCCACCATTTTTCGGCCAACAACATCACCCTTCAGATTCCATGTCTGGTTCTGTCGGAGGTACGCAGCAGGGCTTTCATCAACAAAGTTTCGACATGCAGCAGCACCCCCCACAAGAACCTGTTCAGTTTACTGACAGGCAGCAATCAGTTGGTCCAGATAACTCATTTCCTGAGTATCCAACAATGCACCCTGCACAACCCACCAATGTTCCCCCACACCCAAACACAATGCTGAACCCACCTATGCCATTTGGTTATCCCCCTTTCCTGCAAGACCGAGCTCAACCATTTTATGCTGCTCCCTATGATATGCCTAGGCAGGACTCGTCTTCTGATATTGGTGGAGACCCAAATTCATTAATGGGTTACCCACAAGGGGTCCCAAATGGCCCAAACTTTCAAGGAAATTATCCCCAGCCCTGGAATGCAGCAGGTGTTCCTTTTGAACAAGCACAAGGTGGTGGTATGGCTGTGGATCCAAGGGATTCCAAAGATATATTGGCACCACAGCCCATGGCTCTGCCACCACCACCACCACCTCCGGCCCACATGTTGAAACCAAACTACTATCCTGGTGATCATGGACATGATGGTAAAAGTTATGGTTGGCAGCATGATAACCGTGATAGCTTTAATGCTCAAGGCTGA	1305	0.4797	MLQIRLSKNPSSDGSAGVKQSPVETVTVACPDHLVLADLPVAKGIGIATASSVVRNIGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCDHAFCLDCARSDSSCYLCEERIQKIQTIKVMEGILICAAPHCLKSFLKRVDFESHIHEFHADLLRPNADKEDGNESEAQSVRQPTASDSTARGPIRQVFSPGSNSQHDLEDRTRRQPPRDQAPSRPAMQQKPPFFGQQHHPSDSMSGSVGGTQQGFHQQSFDMQQHPPQEPVQFTDRQQSVGPDNSFPEYPTMHPAQPTNVPPHPNTMLNPPMPFGYPPFLQDRAQPFYAAPYDMPRQDSSSDIGGDPNSLMGYPQGVPNGPNFQGNYPQPWNAAGVPFEQAQGGGMAVDPRDSKDILAPQPMALPPPPPPPAHMLKPNYYPGDHGHDGKSYGWQHDNRDSFNAQG*	435

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g1586	434	MobiDBLite	consensus disorder prediction	166	194	-	-
	Mtr7g1586	434	PANTHER	E3 UBIQUITIN-PROTEIN LIGASE HAKAI	1	403	-	-
	Mtr7g1586	434	ProSitePatterns	Zinc finger C2H2 type domain signature.	125	148	IPR013087	-
	Mtr7g1586	434	MobiDBLite	consensus disorder prediction	409	423	-	-
	Mtr7g1586	434	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	69	120	IPR013083	-
	Mtr7g1586	434	MobiDBLite	consensus disorder prediction	154	275	-	-
	Mtr7g1586	434	PANTHER	E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED	1	403	IPR040383	GO:0016567\|GO:0061630
	Mtr7g1586	434	MobiDBLite	consensus disorder prediction	389	405	-	-
	Mtr7g1586	434	MobiDBLite	consensus disorder prediction	223	274	-	-
	Mtr7g1586	434	ProSitePatterns	Zinc finger RING-type signature.	88	97	IPR017907	-
	Mtr7g1586	434	MobiDBLite	consensus disorder prediction	369	434	-	-
	Mtr7g1586	434	CDD	RING-HC_HAKAI_like	70	106	IPR040380	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g1586	Mtr-Chr7	31085556	31101994	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g1586	1	433	C2H2 Transcription Factor Family	AT5G01160	43.371	1.04e-106	318