Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1508 ATGGCTGAGGAGGGTTTTGAAAATTATTATCATATCCCACAACAAAGTAGAAGAGAAAAACTTCGTTATTTATCTCAAAACCAAACAAGTTTCATTGAATCTTCACCCACCCTTAACCCTAGTTTTTCACCTTTACCTTCTCTTTACGATCCTTCACTCATTTCACCTTTAGATGCTATAAACAGTAACCCTTTTCTTTATCAAATGAATCATGTATACAACCATGGTGGTAGTAATAGTAACAACAATGAAGTTATGTTGTTAAAATCTGAACCATTATCTTTGTCTTTATCGTCAAACAAAAACAACCAGAATCAGATGAGTGCTGCTAATTTTCAGCGTTATGGTTCTGTTGTTGATGTTTCTAGGAACACGGTTCCGTTAGGACCGTTTACGGGTTATGCTTCTGTTTTGAAGGGATCGAGGTTTTTGAAACCTGCACAACAATTATTGGATGAGATATGTGATGTTGGTGTTCGTGCTGAGAAGATTATTGCTGATGCTGATGCATCTTTGATGGAAACTAATCATGTTATTGGTGGAATGATAAATGGTGTTGATGATGAAGATACACTTGGTGGTGATGGAAGGAAGAACAAGTCTAGATTATTAACAGTGCTTGATGAGGTTTGCAGGAGGTACAGACAATACTATCAGCAGATTCATGCAGTAATAACTTCATTTGAATATGTTGCCGGCCTCGGTAACGCAGCTCCGTATGCAAGTTTGGCTATAAATGCCATGTCCAAACATTTTAGATTCTTGAAGAATGTGATTACCGACCAGCTTCAGTTTATCGGTAAGTCTAATTATCATATAAGCAATAGAAAGGATGAATCTCCCAGGTTTCACAACGGCGATGGAGCCCCTTACAGTCAAAGTCCAGGGTTTATGGAACACGTCCAACAACCTGTTTGGCGACCTCAAAGAGGGTTGCCCGAGCGTGCTGTCAGTGTTCTTAGGGGATGGTTGTTTGAACACTTTTTGCATCCTTACCCTAGTGATACTGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGTAACCAGGTGTCTAATTGGTTTATAAATGCAAGAGTAAGGCTTTGGAAACCAATGGTGGAGGAAATACACATGCTTGAATCACAGCAATCTCCAAAGGAATCACAAAGAGATGAACATAGTCGAAACAATTTAAGCGAGAACAACATTGCTGAGAATCCATCTACGTCCACAGACAAGTTTATCGATGTTGCATATAAACGCACTAGAAACGAACTTCACAACATGTCAGTGCCGAATCATAGTATCGCAAGCAATCAACAGGTTGGTAATGTTGGAGTGAGCATGATGAATAATGGTGCAACAAGCAATGGTGTATCTCTGACGCTCGGTCTTCATCAAAATCATGGAATTGGGTTGTCCGAGCCTTTCAACATGAGTGCCGCGCAGCGTTTTGGTCTTGCACATCAACCTGATAGTTACGCCGCGAGCGGTTTTCAATTGCAGAATAGGCAATTTGGGAGAGATTTTATTGGTGGGCAACTTTTGCGTGACTATGTAGGATGA 1551 0.4023 MAEEGFENYYHIPQQSRREKLRYLSQNQTSFIESSPTLNPSFSPLPSLYDPSLISPLDAINSNPFLYQMNHVYNHGGSNSNNNEVMLLKSEPLSLSLSSNKNNQNQMSAANFQRYGSVVDVSRNTVPLGPFTGYASVLKGSRFLKPAQQLLDEICDVGVRAEKIIADADASLMETNHVIGGMINGVDDEDTLGGDGRKNKSRLLTVLDEVCRRYRQYYQQIHAVITSFEYVAGLGNAAPYASLAINAMSKHFRFLKNVITDQLQFIGKSNYHISNRKDESPRFHNGDGAPYSQSPGFMEHVQQPVWRPQRGLPERAVSVLRGWLFEHFLHPYPSDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQSPKESQRDEHSRNNLSENNIAENPSTSTDKFIDVAYKRTRNELHNMSVPNHSIASNQQVGNVGVSMMNNGATSNGVSLTLGLHQNHGIGLSEPFNMSAAQRFGLAHQPDSYAASGFQLQNRQFGRDFIGGQLLRDYVG* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1508 516 Gene3D - 309 371 - -
Mtr7g1508 516 MobiDBLite consensus disorder prediction 375 393 - -
Mtr7g1508 516 Pfam Homeobox KN domain 323 362 IPR008422 GO:0003677|GO:0006355
Mtr7g1508 516 Pfam Associated with HOX 137 260 IPR006563 -
Mtr7g1508 516 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 59 493 - -
Mtr7g1508 516 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 59 493 - -
Mtr7g1508 516 SMART HOX_1 306 370 IPR001356 GO:0003677
Mtr7g1508 516 MobiDBLite consensus disorder prediction 375 407 - -
Mtr7g1508 516 CDD homeodomain 306 367 IPR001356 GO:0003677
Mtr7g1508 516 ProSiteProfiles 'Homeobox' domain profile. 303 366 IPR001356 GO:0003677
Mtr7g1508 516 SUPERFAMILY Homeodomain-like 308 374 IPR009057 -
Mtr7g1508 516 SMART prehox3 132 261 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1508 Mtr-Chr7 30220189 30224888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1508 131 516 Homeobox Transcription Factor Family AT2G16400 36.973 1.75e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mtr7g1508 POX 1.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1508 - - mtr:MTR_7g065050 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1508 7 30220189 30224888 Mtr7g1508 7 30220189 30224888 ECH