Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1471 ATGGCTACTTCAAAGAATGACGCAATGTGCTCAAAGATACAACCACCAGTAACACGATCAGCGTCAAGGAAAAACAAGAATGCTGCAAGTGGAAATAATTCAGAATCTGGAGCTGCAGGTCAAGGAGCTGGGGAAGCAAAAAGGCATTTGTATCATTGCAATTACTGTAATTTCGATATTACAGGAAAAATCCGGATTAAGTGTGTCGTGTGCTCAGATTTCGACTTATGTGTTGAGTGCTTTTCGGTTGGAGCTGAGCTGACACCCCACAAAAGCAATCATGCTTACAGGGTCATGGATAATTTATCTTTCCCTCTCATTTGCCCGGACTGGAACGCAGATGAAGAAATTTTGCTTCTAGAGGGACTTGAAATGTATGGCATGAATAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAGGCATGCACTGAACACTATAGGATTGTGTACTTGGACTCTCCGTGCTTCCCTCTTCCGGACATGTCTCATGTTGTTGGAAAAAGTAGGGAAGAACTTCTTGCTATGGGGAAAGAGCAGGCTGATAACAAGAAAGGATCGGATTCTGGGCTCTCAGTGAAGGCACATGCTGCAGCTAGGACTAACCAAAAGGCGTCCAGTAGAGGCCGCGAAAAAGACTCCTCAAGAAATTCTGGAGGAAATAAGCCAAAATCCTCAAGAAACGACAGCCCTTCTTTGGTTGAAGCCAGTGGTTATAACCCGAAAAGGCAGGAATTTGATATTGAGTATGATAATGATGCTGAGAAATTACTCGCCGATATGGAGTTTAATGACTCTGACACTGCGGACGAGATAGAGATCAAACTTCGTATGATACGTATCTATAATAGAAGGCTTGATGAAAGAGAGCGCAGGAAGAAATTCATACTTGAAAGGAATTTGCTCTATCCAAATCCATTTGAGAAGGACTTAACACCCGAGGAAAAGGCAATCTGTCGTCAATATGATGTGTTCATGCACTTTCATACTAAGGAAGCGCACGAAGAATTGCTTACAACCGTTATCTCGGAACACAGACTTAAGAAAAAAATTCAAGAGCTTAAGGAAGCTCGTGCTGCTGGAAAAAGGAGAAGAACTGAAGCTGAAGAAAGTGCCCTTAGGGCAAGAGAAAGTGCTTATGTTGTTCCGAGAAATCGCGGGGTTCCAAATGCATTGATGTCTCCAGACTCTGCTGATCCTAGACCTGCAGGGCGAGCTACTTCAAGTTCTGTCAATGAAATGGATGCAACAGGAGCAAATTTACTTTCTGAAGCTGAGAAACGTTTGTGCTGCGAGTTAGGGTTGCCTCCAACTGTGTATCTGAAGATGCAGGAGGACCTGTCGATACAAATGATTGCTGGCAACGTCTCTTCAAAATCCGATGCTCATCGGATGTTCCAGATGGATACCATGAAAGTTGACATGGTTTATGATATGCTCATTAAGAAGGGATTTGGTTCACCCTGA 1476 0.4343 MATSKNDAMCSKIQPPVTRSASRKNKNAASGNNSESGAAGQGAGEAKRHLYHCNYCNFDITGKIRIKCVVCSDFDLCVECFSVGAELTPHKSNHAYRVMDNLSFPLICPDWNADEEILLLEGLEMYGMNNWAEVAEHVGTKNKEACTEHYRIVYLDSPCFPLPDMSHVVGKSREELLAMGKEQADNKKGSDSGLSVKAHAAARTNQKASSRGREKDSSRNSGGNKPKSSRNDSPSLVEASGYNPKRQEFDIEYDNDAEKLLADMEFNDSDTADEIEIKLRMIRIYNRRLDERERRKKFILERNLLYPNPFEKDLTPEEKAICRQYDVFMHFHTKEAHEELLTTVISEHRLKKKIQELKEARAAGKRRRTEAEESALRARESAYVVPRNRGVPNALMSPDSADPRPAGRATSSSVNEMDATGANLLSEAEKRLCCELGLPPTVYLKMQEDLSIQMIAGNVSSKSDAHRMFQMDTMKVDMVYDMLIKKGFGSP* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1471 491 Pfam Zinc finger, ZZ type 48 90 IPR000433 GO:0008270
Mtr7g1471 491 Gene3D - 42 99 IPR043145 -
Mtr7g1471 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 158 IPR017930 -
Mtr7g1471 491 Gene3D - 406 489 IPR036388 -
Mtr7g1471 491 ProSiteProfiles SWIRM domain profile. 405 491 IPR007526 GO:0005515
Mtr7g1471 491 CDD SANT 126 151 IPR001005 -
Mtr7g1471 491 MobiDBLite consensus disorder prediction 222 240 - -
Mtr7g1471 491 ProSiteProfiles Myb-like domain profile. 111 154 IPR001005 -
Mtr7g1471 491 ProSitePatterns Zinc finger ZZ-type signature. 53 80 IPR000433 GO:0008270
Mtr7g1471 491 MobiDBLite consensus disorder prediction 1 41 - -
Mtr7g1471 491 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 16 490 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mtr7g1471 491 ProSiteProfiles Zinc finger ZZ-type profile. 48 104 IPR000433 GO:0008270
Mtr7g1471 491 Pfam Myb-like DNA-binding domain 110 151 IPR001005 -
Mtr7g1471 491 ProSiteProfiles SANT domain profile. 106 158 IPR017884 -
Mtr7g1471 491 SMART sant 107 156 IPR001005 -
Mtr7g1471 491 Coils Coil 347 374 - -
Mtr7g1471 491 SUPERFAMILY Homeodomain-like 408 488 IPR009057 -
Mtr7g1471 491 SMART zz_5 47 91 IPR000433 GO:0008270
Mtr7g1471 491 SUPERFAMILY RING/U-box 48 114 - -
Mtr7g1471 491 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 16 490 - -
Mtr7g1471 491 MobiDBLite consensus disorder prediction 181 241 - -
Mtr7g1471 491 MobiDBLite consensus disorder prediction 389 415 - -
Mtr7g1471 491 SUPERFAMILY Homeodomain-like 104 156 IPR009057 -
Mtr7g1471 491 Gene3D - 105 156 - -
Mtr7g1471 491 PIRSF Txn_adaptor_ADA2 378 490 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mtr7g1471 491 PIRSF Txn_adaptor_ADA2 38 382 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mtr7g1471 491 MobiDBLite consensus disorder prediction 1 39 - -
Mtr7g1471 491 CDD ZZ_ADA2 51 99 IPR041983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1471 Mtr-Chr7 29501273 29506548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1471 21 489 EF-hand Containing Proteins AT3G07740 42.777 6.17e-135 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr7g1471 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1471 K11314 - gmx:100811887 645.966