Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1469 ATGTCTTATAGCTATTTCCCCATTGCTTTCCAAAGAAAGATGGAATACACCCAAAACCCTAATAAATCTGACCAAATAAGATGGAGCTCTGACGACCCAGGTCAAGTTAGGTCTTATTCTTGTACTTTTTGCAAGAGAGGATTCTCTAATGCACAAGCATTAGGAGGCCACATGAATATCCATAGAAGAGATAGAGCCAAGCTCAAACAACAATCTTCCGAAGAAAATTTGCTTTCTTTGGACATCGCAAACAAAAACCCTAATGATCAAGGAGATTTGGAAGAGAATCACGAAACTCAAAGGGGTAAGTTAATTACTACAAAAGAACTTCCTCATAGTTCTTCATTTGTTGGAACTCAAAGGATTGAAGAGAAGAAATGTGATTTAGACCTTGAGCTTAGGTTAGGTTATCAGCCAATGGATTCATCAACATTGAGCACTCGATCATTTTTCTGA 456 0.3772 MSYSYFPIAFQRKMEYTQNPNKSDQIRWSSDDPGQVRSYSCTFCKRGFSNAQALGGHMNIHRRDRAKLKQQSSEENLLSLDIANKNPNDQGDLEENHETQRGKLITTKELPHSSSFVGTQRIEEKKCDLDLELRLGYQPMDSSTLSTRSFF* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1469 151 MobiDBLite consensus disorder prediction 88 104 - -
Mtr7g1469 151 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Mtr7g1469 151 SUPERFAMILY beta-beta-alpha zinc fingers 37 65 IPR036236 -
Mtr7g1469 151 MobiDBLite consensus disorder prediction 80 104 - -
Mtr7g1469 151 PANTHER OS07G0101800 PROTEIN 3 75 - -
Mtr7g1469 151 PANTHER OS07G0101800 PROTEIN 84 140 - -
Mtr7g1469 151 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 3 75 - -
Mtr7g1469 151 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 84 140 - -
Mtr7g1469 151 Gene3D Classic Zinc Finger 15 103 - -
Mtr7g1469 151 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1469 Mtr-Chr7 29467845 29469077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1469 14 76 C2H2 Transcription Factor Family AT3G09290 55.556 1.01e-19 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g1469 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1469 - - ccaj:109793777 182.57