Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1436 ATGAGATGCACCATTCTCACAAACTCATTTCTCAAAATTATCATTTTTCTCATTCTACAAACTTTACCACTCACAACACAAACAAAGATCTTAACTTTACCACTCAAATCACAAGTTATCTCATCTGGGTATCTTCCAAGACCACCAAACAAGCTTAGGTTTCATCACAATGTTAGTCTCACTGTTTCAATTACTATTGGCACCCCCCCACAAAACGTGTCATTAGTCATTGACACAGGAAGTGAACTTTCATGGCTTCATTGCAACAACTCAACAAACCGGGTCATGCCTGACCCGGTTTTTAACCCGAATTTTTCTTCTTCATACAAACCTATTTCTTGTTCTTCATCTACATGCACTACCCAAACCCGAGATTTTCCCATACCTGCTTCATGCGACTCCAACAATCATTGCCATGCAACTCTTTCATACGCAGATTTTTCTTCCTCTGAAGGGAACCTTGCTTCTGATTCATTCGGGTTTGGAGCATCCGATAACCCGGGAATTGTATTTGGGTGTATGGACTCAAGCATTAGCACAAACTCTGATGGAGATTTTAACACAACCGGGTTAATGGGTATGAATCTCGGGTCTCTCTCTTTTGTTTCTCAGCTTAAGATACCCAAATTCTCATATTGTATATCGGGTTCGGATTTCTCGGGTATTTTGCTTCTTGGGGAATCCAATTTCTCATGGGTCGGGTCGTTGAATTATACTCCTTTGGTTCAAATATCCACTCCTTTGCCCTATTTTGATCGGGCCGCGTACACAGTTCGGTTAATGGGAATTAGGGTTTCAGAGAAGTTACTTAATTTGTCTAGTGATATGCTCGCTCCAGATCATACTGGAGCGGGTCAAACTATGTTTGATTTGGGTACTCAGTTTACATTCTTACTTGGGCCGGTTTATAGTGTGTTGAGAGAAGAGTTTCTTAATCAAACAAATAGTACTTTACAGGTATTGGATGATCCGAATTTTGCATTTCAAGTAGCAATGGATCTTTGTTATCGGGTTCCATTGAACCAATCAAAATTACCCGAGTTGCCAAGTGTTAGTTTAGTATTTGATGGAGTCGAGATGAGGGTTTCGGGCGAACAACTTTTATATCAGGTTCCAGGTCGGGTTGTAGGGAATGATTCAGTTTATTGTTTCACATTTGGAAACTCGGATCTACTAGGTGTAGAGTCATTTATCATTGGGCATCACCAACAACAGAATATGTGGATGGAATTTGATCTTGTAAAATCTAGGGTTGGTTTGGCTCACGTACGATGTGATATGGTGGGTCAAAAAGTATTGGGTTTTGTGTAG 1311 0.4035 MRCTILTNSFLKIIIFLILQTLPLTTQTKILTLPLKSQVISSGYLPRPPNKLRFHHNVSLTVSITIGTPPQNVSLVIDTGSELSWLHCNNSTNRVMPDPVFNPNFSSSYKPISCSSSTCTTQTRDFPIPASCDSNNHCHATLSYADFSSSEGNLASDSFGFGASDNPGIVFGCMDSSISTNSDGDFNTTGLMGMNLGSLSFVSQLKIPKFSYCISGSDFSGILLLGESNFSWVGSLNYTPLVQISTPLPYFDRAAYTVRLMGIRVSEKLLNLSSDMLAPDHTGAGQTMFDLGTQFTFLLGPVYSVLREEFLNQTNSTLQVLDDPNFAFQVAMDLCYRVPLNQSKLPELPSVSLVFDGVEMRVSGEQLLYQVPGRVVGNDSVYCFTFGNSDLLGVESFIIGHHQQQNMWMEFDLVKSRVGLAHVRCDMVGQKVLGFV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1436 436 Pfam Xylanase inhibitor C-terminal 255 420 IPR032799 -
Mtr7g1436 436 Gene3D Acid Proteases 229 429 IPR021109 -
Mtr7g1436 436 PANTHER ASPARTIC PROTEINASE PCS1 15 432 - -
Mtr7g1436 436 SUPERFAMILY Acid proteases 61 426 IPR021109 -
Mtr7g1436 436 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 75 86 IPR001969 GO:0004190|GO:0006508
Mtr7g1436 436 Pfam Xylanase inhibitor N-terminal 62 226 IPR032861 -
Mtr7g1436 436 PANTHER ASPARTYL PROTEASE-RELATED 15 432 IPR001461 GO:0004190|GO:0006508
Mtr7g1436 436 CDD pepsin_A_like_plant 61 425 IPR034161 -
Mtr7g1436 436 Gene3D Acid Proteases 55 226 IPR021109 -
Mtr7g1436 436 ProSiteProfiles Peptidase family A1 domain profile. 60 421 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1436 Mtr-Chr7 29114177 29116280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1436 62 428 Miscellaneous Gene Families AT1G77480 22.785 2.33e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1436 - - gmx:100813686 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1436 7 29114177 29116280 Mtr7g1436 7 29114177 29116280 ECH
Mtr7g1436 7 29114177 29116280 Mtr2g3373 2 47804517 47806137 ECH
Mtr7g1436 7 29114177 29116280 Mtr4g1904 4 32234936 32236626 ECH