Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1435 ATGTTTGAAAAAGATAAACACATATTGGTTTTTTTTAAGTCCAATCACAATACGGGAGTTAGAATATACACACACAAAAAGTGGCTATACAATGACTCATTCGCAATCCAAGTGACTTTCTTAAAGCATCGTAGCGGACTCTTCAAGAAAGTCAATGAGCTTTGCACCCTTTGTGGTGTAGATGTTGCTCTCGTTGTATTCTCACCTAGTAAAAAGGTATTTTCTTTCGGTCATCCAAATGTTGATATGGTCATAGATCGCTATCTCTCTGGGGTCCCATCGCAAAACAACAACACCATAGAATTTATTGAGGCTCATCGTAGCACCAAAGTGTGTGAGCTCAATGCTATGTTGATTCAAATCAACAACACACTAGACGAGGAGAAAAAGTGTGGTGATGAGTTGAGTCTTTCATGCAAGGCGTTGAAGGCTCAATTTTGGTGGGCTTATCCGATTGATGGAATGAATAAGGCTCAGCTTGAATTATTCAAGAAGATGTTGGTGGAGCTTAAGAAACTTGTTAATCAACATGTTGATAGGAGTGCAATTCAGGGTGCTACTGCTCACACTTTTCCATTTTCTGTTGGTAAAGATTTATCCTCTAACATCCCTCTCCATTATCAGCCAAATCCTCAACAAATTGAGATGTTTTCGCCACAAAATTTTCATAACCCTATGTTGCAACCTCATTTAATTGGTTTCAACAATATGGGAAGAGGAAGATATGGACCCCCCGGATTTTATTGA 747 0.3882 MFEKDKHILVFFKSNHNTGVRIYTHKKWLYNDSFAIQVTFLKHRSGLFKKVNELCTLCGVDVALVVFSPSKKVFSFGHPNVDMVIDRYLSGVPSQNNNTIEFIEAHRSTKVCELNAMLIQINNTLDEEKKCGDELSLSCKALKAQFWWAYPIDGMNKAQLELFKKMLVELKKLVNQHVDRSAIQGATAHTFPFSVGKDLSSNIPLHYQPNPQQIEMFSPQNFHNPMLQPHLIGFNNMGRGRYGPPGFY* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1435 248 Gene3D - 32 112 IPR036879 GO:0003677|GO:0046983
Mtr7g1435 248 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 37 76 IPR002100 GO:0003677|GO:0046983
Mtr7g1435 248 PANTHER MADS BOX PROTEIN 35 177 - -
Mtr7g1435 248 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL23-RELATED 35 177 - -
Mtr7g1435 248 SUPERFAMILY SRF-like 32 94 IPR036879 GO:0003677|GO:0046983
Mtr7g1435 248 PRINTS MADS domain signature 42 57 IPR002100 GO:0003677|GO:0046983
Mtr7g1435 248 PRINTS MADS domain signature 57 78 IPR002100 GO:0003677|GO:0046983
Mtr7g1435 248 ProSiteProfiles MADS-box domain profile. 37 80 IPR002100 GO:0003677|GO:0046983
Mtr7g1435 248 SMART madsneu2 19 79 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1435 Mtr-Chr7 29111876 29112622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1435 36 180 Type I MADS-box Gene Family AT5G60440 49.324 1.39e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mtr7g1435 SRF-TF 1.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1435 - - mtr:MTR_7g062350 517.694