Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1411 ATGTCGGATATGAAAGATAGGCAGCGGTGGAGAGCAGAAGAGGATGCATTATTACGCGCTTATGTTAAACAGTATGGACCTAGAGAATGGAACCTCGTGTCTCAGCGCATGAACACGCCTCTTAACAGGGACGCAAAATCGTGTTTAGAAAGGTGGAAGAATTACCTCAAGCCAGGTATTAAGAAAGGATCTCTCACCGAAGAAGAACAGCGTCTAGTCATTAGCCTTCAAGCAACACACGGAAACAAATGGAAGAAAATTGCCGCGCAAGTTCCCGGTCGAACTGCTAAGAGGTTAGGGAAGTGGTGGGAAGTATTCAAAGAGAAACAACAAAGAGAAACAAAAGGTAGTATTAACAGAACTGTCGACCCGATTAACGATAGCAAGTACGAACACATACTCGAAAGTTTTGCTGAGAAACTAGTGAAAGAGAGACCATCTCCTTCATTTGTCATGGCTGCTTCCAATAGCTCTTATCTTCATACCGATGCACAAGCACCAACTCCGGGATTGCTTCCTTCATGGCTATCGAATTCAAATAATGCAGCACCTGTTAGGCCAAATTCACCATCAGTGACACTAAGCCTATCTCCCTCGACAGTAGCAGCGCCTCCTCCGTGGATGCAACCAGTACGAGGACCGGACAACGCTCCTCTTGTTCTTGGGAACGTAGCTCCACATGGCGCTGTTCTAAGTTACGGCGAAAGCATGGTAATGTCTGAATTGGTTGATTGCTGCAAGGAGTTGGAAGAAGTGCATCATGCATTGGCAGCGCACAAGAAAGAGGCGGCATGGAGGTTAAGCCGAGTGGAGCTGCAGTTGGAGTCAGAGAAAGCGAGTCGAAGGAGGGAGAAGATGGAGGAAATCGAAGCGAAGATAAAAGCTTTAAGGGAGGAACAAGCTGTTGCTTTGGATAGAATTGAAGGAGAATATAGGGAACAGTTAGCAGGGCTGAGAAGAGATGCTGAAACCAAAGAGCAGAAATTGACTGAACAATGGGCTGCGAAGCATTTACGCCTTACCAAGTTTCTAGAACAAGTAGGGTGTAGATCAAGGCATGCTGAATCAAATGGAAGATAG 1080 0.4611 MSDMKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVISLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGSINRTVDPINDSKYEHILESFAEKLVKERPSPSFVMAASNSSYLHTDAQAPTPGLLPSWLSNSNNAAPVRPNSPSVTLSLSPSTVAAPPPWMQPVRGPDNAPLVLGNVAPHGAVLSYGESMVMSELVDCCKELEEVHHALAAHKKEAAWRLSRVELQLESEKASRRREKMEEIEAKIKALREEQAVALDRIEGEYREQLAGLRRDAETKEQKLTEQWAAKHLRLTKFLEQVGCRSRHAESNGR* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1411 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Mtr7g1411 359 Coils Coil 269 306 - -
Mtr7g1411 359 Coils Coil 308 332 - -
Mtr7g1411 359 SUPERFAMILY Homeodomain-like 7 101 IPR009057 -
Mtr7g1411 359 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Mtr7g1411 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Mtr7g1411 359 CDD SANT 9 56 IPR001005 -
Mtr7g1411 359 Gene3D - 7 61 - -
Mtr7g1411 359 Pfam Myb-like DNA-binding domain 10 70 - -
Mtr7g1411 359 ProSiteProfiles Myb-like domain profile. 2 56 IPR001005 -
Mtr7g1411 359 Gene3D - 65 125 - -
Mtr7g1411 359 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 4 359 - -
Mtr7g1411 359 SMART sant 6 58 IPR001005 -
Mtr7g1411 359 SMART sant 61 109 IPR001005 -
Mtr7g1411 359 CDD SANT 66 107 IPR001005 -
Mtr7g1411 359 PANTHER TRANSCRIPTION FACTOR AS1 4 359 IPR031055 GO:0005634|GO:0006351|GO:0010338
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1411 Mtr-Chr7 28634397 28637396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1411 4 350 MYB Transcription Factor Family AT2G37630 67.030 5.69e-160 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g1411 Myb_DNA-bind_6 3.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1411 K09422 - gmx:100819082 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1411 7 28634397 28637396 Mtr7g1411 7 28634397 28637396 ECH