Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1396 ATGGGTAACAAAATCAGCAATTTGTGCCTTTGTTCTGCCGGCACCGGAGATATCTCCGGCAGGTTACAAAACACCTTTACCTTGTTGTCCAAGAAACATGACAAAGCTATTTGCAACTCTATCAGCTATGTAAGACCGAACCCACCTCGAATCTCCAACGATACATTCTCTGACGACGATGATACCACCCTCATGACTTTCCGGTCAGTGGCCGGCGCCACCGTGAGTGCAAACTCCTCATCAACACCTTCCATTTCCCTTGATGACTCTCTTCAACATAGCACTGTTTTGGATTCATCTGCTTCTTTTGAGAGCTTTGGTTCCTTTACTTCCACAATGATGCATCCTCAATACCAAAATCCGCATAATCCTCGTACCTCTTCTGTGTGTACTTCCATTGAAGAAGGGTTATCTTCGAGTCCTTTCGATCGTGTGTTTAATTCTAATTCCATTGAGAAATGTTTAGAACAAATGAAGGTGAACAAGCCTAATAAGATCAGCTTGAAGAAGGTTCTTGGTAGGGTTTTCTCTAATGCAGTATCTTTTGGAAAAGGTTCATTTTTTAAGAAAAATGATAATGTTAATGCTAATGCAAATGCAAGAGTGAGTTGTAGTACTAGTTTGAGTGATGAGTTGAGATTGCATGATAATAACTATTTGGATGATGATGGTGATGGATGTGGATCTGATAATTTGTTAATGGTGTGTGAGAATCTTCATATGGCTCAAGGAAAAGGCGGTGAAGATCGTATGCATATTGTGATATGCGAAGATCATGGATGGGTTTATGTCGGAATTTATGATGGATTTAATGGTCCTGATGCAACTGATTATCTTCTTCATAATATGTTTTATGTTGTTCATGACGAGCTTAAAAGGTTTCTATGTAATCAAAATAGTAAAAATGTGAAAAGTGAAGATTTTAGTCACTCGGATGTGTTGGAAGCTCTTTCTGAGGCAATGAGGAAAACTGAGAATGCATTTTTGAAGATAATTGATGAGATGATTGCTCATAATCCTGTTTTGGCTATGATGGGATCTTGTGTTTTGGTTATGTTGATGAAAGGTCAAGATGTTTATTTGATGAATGTTGGTGACAGTCGTGCCGTTTTAGCTACTCGGATCGGGAATCCTCTTCAGCTCACAATGGATCATAGCACTCATGTGAAAGAGGAGGTTTATAGAATCAGACAGGAGCATCCGGATGATCCATCTGCAATAACGAAAGGACGAGTGAAAGGTTACTTAAATGTCACAAGGGCTTTTGGAGCAGGGTTCCTTAAGCATCCTAAGCAAAATGATGCAATGTTAGAGACTTTCAAAGTTAACTACATAGGGGAATCTCCATATATCACATGCTCCCCTTCACTATATCATCACAGGCTCAACTCAAGTGACAAATTTCTTATACTATCTTCTGATGGACTTTACCAATACTTCACCAATGAAGAAGCAATGGCTAAAGTAGAGTCATTCATCACCATGTTTCCAGATAAAAATCCTGCACAACTTCTCACTGAAGAAGCACTAAGTCATGCAGCCAAAAAAGCTGGTATTGAGTTCCATGAGTTGCTTGATATACCACAAGGGGAAAGAAGACTATACCATGATGACATTTCCATTGTGATAATATCCTTGGAGGGAAAAATATGGCGTTCATTATTGTAA 1668 0.3909 MGNKISNLCLCSAGTGDISGRLQNTFTLLSKKHDKAICNSISYVRPNPPRISNDTFSDDDDTTLMTFRSVAGATVSANSSSTPSISLDDSLQHSTVLDSSASFESFGSFTSTMMHPQYQNPHNPRTSSVCTSIEEGLSSSPFDRVFNSNSIEKCLEQMKVNKPNKISLKKVLGRVFSNAVSFGKGSFFKKNDNVNANANARVSCSTSLSDELRLHDNNYLDDDGDGCGSDNLLMVCENLHMAQGKGGEDRMHIVICEDHGWVYVGIYDGFNGPDATDYLLHNMFYVVHDELKRFLCNQNSKNVKSEDFSHSDVLEALSEAMRKTENAFLKIIDEMIAHNPVLAMMGSCVLVMLMKGQDVYLMNVGDSRAVLATRIGNPLQLTMDHSTHVKEEVYRIRQEHPDDPSAITKGRVKGYLNVTRAFGAGFLKHPKQNDAMLETFKVNYIGESPYITCSPSLYHHRLNSSDKFLILSSDGLYQYFTNEEAMAKVESFITMFPDKNPAQLLTEEALSHAAKKAGIEFHELLDIPQGERRLYHDDISIVIISLEGKIWRSLL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1396 555 SMART PP2C_4 232 544 IPR001932 -
Mtr7g1396 555 Gene3D - 206 552 IPR036457 -
Mtr7g1396 555 Pfam Protein phosphatase 2C 286 511 IPR001932 -
Mtr7g1396 555 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 15 294 - -
Mtr7g1396 555 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 297 555 - -
Mtr7g1396 555 SUPERFAMILY PP2C-like 245 547 IPR036457 -
Mtr7g1396 555 CDD PP2Cc 247 546 IPR001932 -
Mtr7g1396 555 ProSiteProfiles PPM-type phosphatase domain profile. 232 546 IPR001932 -
Mtr7g1396 555 PANTHER PROTEIN PHOSPHATASE 2C 15 294 IPR015655 GO:0004722|GO:0006470
Mtr7g1396 555 PANTHER PROTEIN PHOSPHATASE 2C 297 555 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1396 Mtr-Chr7 28436265 28438928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1396 1 553 PP2C-type Phosphatase Gene Family AT1G07630 42.645 1.08e-169 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1396 - K01102 gmx:100804061 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1396 7 28436265 28438928 Mtr7g1396 7 28436265 28438928 ECH