Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1392 ATGTCTCCACCTGGTTCATCAAGATGGAGCCCTACAACTGAACAACTTATGATCTTAGAGGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTGTTCAAATTCAGCAAATAACTACTCACCTTTCTTTCTATGGTAGGATAGAAGGAAAAAATGTTTTCTATTGGTTTCAGAATCATAAGGCTAGGGATAGACAGAAGTTAAGAAGGAAACTTAACAAACAACTGCAGCTACAGCAGCAGCAGCAGCAGCAACAACAACAACAACTACATGTTCATCATTGTCAACTCAATCATAATAATATGATTAGTAACCATTTTGTTGGTAGCACTTTTGGTTACCCTTTTGGATCTAATGCACAAGACTTTTCCTTTTTTAACTCACCTAGCTTGCTTTTTGAGGGATCAGTATCTGCAAATACATCAGAAGGGGAAATAAATTGCAAATGGAATGGTTATAATAACCAACAAAGTTTGATGGAGAAGAAAGATATTGCATTCAGCAACTATGGTTGGACGACACTCATGGATAATGTTAATCATGAAGCACCTTCATGTTGCACTAAACCTCTCAAGACTCTTGATCTTTTTCCACTCACAACAACAAGAATCAAAGACTAG 621 0.3688 MSPPGSSRWSPTTEQLMILEELYRSGIRTPSAVQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQQQQQQQQLHVHHCQLNHNNMISNHFVGSTFGYPFGSNAQDFSFFNSPSLLFEGSVSANTSEGEINCKWNGYNNQQSLMEKKDIAFSNYGWTTLMDNVNHEAPSCCTKPLKTLDLFPLTTTRIKD* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1392 206 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Mtr7g1392 206 Coils Coil 65 89 - -
Mtr7g1392 206 CDD homeodomain 8 67 IPR001356 GO:0003677
Mtr7g1392 206 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Mtr7g1392 206 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 205 - -
Mtr7g1392 206 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 205 IPR044555 GO:0003700|GO:0099402
Mtr7g1392 206 SMART HOX_1 4 71 IPR001356 GO:0003677
Mtr7g1392 206 Gene3D - 2 67 - -
Mtr7g1392 206 Pfam Homeodomain 7 66 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1392 Mtr-Chr7 28396690 28398256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1392 1 205 Wox Gene Family AT2G28610 42.017 6.41e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr7g1392 Homeodomain 1.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1392 - - cam:101510991 273.478