Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1356 ATGGAGTGTGGTTTAGATCTGCATGCAAAGTTGGTGAATGAAACAGAACAAGTTGGTTTTGGAAATTTAGCAGAAGAAAATTGGCTTAATAATACTACAAATGATCAAGATGGTGATCTTTTAGGTATGAATATGAATGATGATGCATCTATGTTCTATGCTGATTTTCCTCCTTTACCTGATTTTCCATGCATGTCATCATCATCCTCATCTTCATCATCTTCAACACCATTGAAAACCATTGCATGTACTTCAACTACAACAACTACTACCTCTTCTTCTTCCTCAGCTTCTTCTTCATCTGCAGCTTCTTGGGCTGTTTTGAAATCAGATGTTGAAGTAGATCATCAAGGTTATCAAAAACATGGTCATCCATTAGATTATCATCATGGTCATCCTCCAACAACTTTGTCATCAACTGCTTCTATGGAGATTTCTCAACAACAGCAACAAGATCTTGGTGTTTCTAACAATGATGTTGTTGTTGGTGGTGGTGATTGCATGGATGATGTTAACATTATGGATACTTTTGGTTACATGGAGCTTTTAGAAGCTAATGAATTTTTTGACCCTGCTTCGATTTTTCAAAATGAAGATGAAAACCCTTTAGTGGATTTCACTCAAGAGCAACAAGTTCAAGTGCAAGACGGATATCAACAACATCAACAAGTTCCGATGATAGTGCATGATGATCGGGAAAATAAACCGCAACAAGTGAATATCGAGGAGAATAACGACGATGTTTTTGTGTGTGACGGTGTAAATGGGGAAGAGAGTATTCAAGGAGATGAATTAGGTGCATGTGATGGTGTAAGTGATGAAATGAGTATGGTTTTCTTGGAGTGGCTTAAATCGAACAAAGACAGTGTCTCCGCGAATGATTTGAGGAATGTGAAGCTTAAGAAATCAACGATTGAAAGTGCTGCTAGGAGATTAGGTGGTGGAAAAGAAGGGATGAAACAATTGTTGAAGCTCATTCTTGAATGGGTTCAAACTAGTCATCTTCATAACAAAAGACTCAAAGAAAACGCCAACACGAACACAATAATACCTTCAAATATTGTTCCTCAACAACATCATTTTCAAGATCCGTGTCAGAACCAAAACACAGCAAACACATTTGCACCTGAATCGAACGCATGTTTCAACCAAACATCATGGCTAGATCAAACACCTCTCATTGTACCTCCACAACAATTTTCACAACCAATGGTTGGAGTTGGAGTTGGATTTGTTGCTGATCCTTACACAAATGGTTCTGTTTCAAATAACATTAACCCTTACCAACCTGCTGTTACTAATGAATATCACATGTTGGAATCAAATCATTCATGGGGTGCTTCTCAATTCAATGTTGCACCAAACTACAATCAATCATTTGTGGAAAATAACAACAATGTGCTACAACCTCATGGTATGAATTTTGGAGGTTATGGAAATCAATATAATTCTTATCAGTTGTTTCCTGGTCCTGGTGATAGGTTGATGAGGTTAGGTCCTTCTGCTACAAAAGAAGCTAGAAAGAAGAGGATGGCTCGGCAACGGCGGTTTATGTCTCATCATAGGCATCATAATATTAACCATCATCAGAATATTCAAGGTTCTGATCCACTTGCGAGATTAGGTAGTGGTGATAGTTGCACCAATGTTGCTGCTGGTGGTTCTCATGCAAATCCAGCGAACTGGATGTATTGGCAGACTATGACCGGTGGGACAGCAGCCTCCTTGGCACCTGTTGTTCCGGCTGAGCCGACGCAGCCTCCAGTGGACCGTGACCGCCCCACCATGCAGACACAGAGTTCTCACCAGGGTCGAAGTGCATCCGATAGGAGACAGGGTTGGAAGCCAGAAAAGAACTTGAGGTTCCTTCTACAAAAGGTTTTGAAGCAAAGTGATGTCGGAAGTCTGGGGAGAATTGTTTTGCCAAAAAAAGAGGCAGAAACACATTTGCCAGAATTGGAGGCAAGAGATGGAATTTCGATTACAATGGAAGACATTGGAACTTCTCGAGTTTGGAATATGCGTTATAGATATTGGCCTAACAACAAAAGCAGGATGTATTTGCTGGAGAACACCGGTGATTTTGTGAAAGCTAATGGACTCCAAGAAGGAGATTTCATAGTGATATATTCTGATGTGAAGTGTGGCAAATTTATGATAAGGGGAGTTAAAGTGAGGCAACAAGGAACAAAACCAGAGGCAAAAAAAGCAGGAAAATCACAGAAAAACCAGCATGGGAATAATGCTGCAAATTTAGCTGGAACTGCAGTGGATAATAATGGCACGCCATCTTCACCAAAGAGAAAAAAATGA 2313 0.3995 MECGLDLHAKLVNETEQVGFGNLAEENWLNNTTNDQDGDLLGMNMNDDASMFYADFPPLPDFPCMSSSSSSSSSSTPLKTIACTSTTTTTTSSSSSASSSSAASWAVLKSDVEVDHQGYQKHGHPLDYHHGHPPTTLSSTASMEISQQQQQDLGVSNNDVVVGGGDCMDDVNIMDTFGYMELLEANEFFDPASIFQNEDENPLVDFTQEQQVQVQDGYQQHQQVPMIVHDDRENKPQQVNIEENNDDVFVCDGVNGEESIQGDELGACDGVSDEMSMVFLEWLKSNKDSVSANDLRNVKLKKSTIESAARRLGGGKEGMKQLLKLILEWVQTSHLHNKRLKENANTNTIIPSNIVPQQHHFQDPCQNQNTANTFAPESNACFNQTSWLDQTPLIVPPQQFSQPMVGVGVGFVADPYTNGSVSNNINPYQPAVTNEYHMLESNHSWGASQFNVAPNYNQSFVENNNNVLQPHGMNFGGYGNQYNSYQLFPGPGDRLMRLGPSATKEARKKRMARQRRFMSHHRHHNINHHQNIQGSDPLARLGSGDSCTNVAAGGSHANPANWMYWQTMTGGTAASLAPVVPAEPTQPPVDRDRPTMQTQSSHQGRSASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQGTKPEAKKAGKSQKNQHGNNAANLAGTAVDNNGTPSSPKRKK* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1356 770 SUPERFAMILY DNA-binding pseudobarrel domain 623 719 IPR015300 -
Mtr7g1356 770 MobiDBLite consensus disorder prediction 591 607 - -
Mtr7g1356 770 MobiDBLite consensus disorder prediction 727 770 - -
Mtr7g1356 770 SMART B3_2 624 724 IPR003340 GO:0003677
Mtr7g1356 770 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 748 IPR044800 GO:0003700
Mtr7g1356 770 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 748 - -
Mtr7g1356 770 Gene3D - 620 740 IPR015300 -
Mtr7g1356 770 MobiDBLite consensus disorder prediction 578 615 - -
Mtr7g1356 770 Pfam B3 DNA binding domain 625 721 IPR003340 GO:0003677
Mtr7g1356 770 CDD BfiI_C_EcoRII_N_B3 622 723 - -
Mtr7g1356 770 MobiDBLite consensus disorder prediction 741 763 - -
Mtr7g1356 770 ProSiteProfiles B3 DNA-binding domain profile. 624 726 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1356 Mtr-Chr7 27921133 27925238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1356 19 750 B3 DNA Binding Superfamily AT3G24650 46.005 1.22e-160 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mtr7g1356 B3 1.6e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1356 - - gmx:100795226 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1356 7 27921133 27925238 Mtr7g1356 7 27921133 27925238 ECH