Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1353 ATGTCTTCTCTCAAAACCCTTTCCTCTTTCTACCTTCTCTTCTTCATCTTCTTCTTCTGCAACAAAGCCTCAACAAAAACCACACCACCTTCAACTTCCTCTGACATAGAACTTCTTTTGTTCAAAATCAAACCTTCACTTCAAGGCAAAACTGAGAACCTTGTCCTCTCATCATGGAACACTTCAATCCCACTTTGTCAATGGAGAGGACTCAAATGGGTCTTCACAAACGGTTCATCACTTTCATGCACTGACTTATCTTCACCACAATGGAACAATCTTTCATTCTTCAAAAACCCTTTTTTGCATTTGTTTTCTCTTCAACTACCTTCTGCAAATCTCTCTGGTTCTCTCCCTAGAGAGATTGGTCAGTTTCCTATGCTTCAAAGTCTTTACCTTAATATTAACTCATTGACTGGTACTATTCCTCTTGAACTTGGTTATGGTTCTTCACTTTCTGAAGTTGATTTGAGTGATAATCTTTTGAATGGTGTTCTTCCACCTTCTATATGGAATTTGTGTGATAAACTTCTTTCTCTTAAACTTCATGGAAATTCTTTATCTGGGTCTGTTTCAGAACCTGCATTACCTGATTCATCTTGTAAATTTTTGCAGTTTCTTGATTTAGGTGGGAATAAATTTTCTGGTAATTTTCCTGATTTTGTTACTACTTTTGGTGCCTTAAAAGAGCTTGATTTAGGGAATAATATGTTTAGTGGTGTAATTCCTTATGGTTTAGTTGGACTTAGGTTAGAAAAATTGAATCTTTCTCATAATAACTTTAGTGGGGTGGTGCCATTTTTCGGAGAAACATCGAAATTCGGTGTTGATGCTTTTGAAGGGAATAGTCCTGATTTATGTGGTACACCTTTGCAAAGTTGTAGTAAGAATTCTTCATTGAGTTCTGGTGCTGTTGCTGGTATTGTTATTAGTCTTATGACAGGTGCTGTTGTTTTGGCTTCTTTGTTGATTGGTTATATGCAAAACAAGAAGAAAAAGGGGAGTGGTGATAGTGAAGATGAATTGAATGATGAAGAAGATGATGAAGAAAACGGTGGCGGAAATTCGGTTGGTGGAAATGGTGAAGGGAAGCTTATGTTATTTCCTGGTGGTGAGAATTTGACACTTGATGATGTGTTGAATGCGACCGGGCAAGTTATGGAGAAGACGTGTTATGGAACAGCTTATAAGGCTAAGCTTGCTGATGGTGGAACAATTGCTTTGAGGTTGTTGAGAGAAGGTACTTGCAAGGATAGGACTTCGTGTTTGGCGGTTATAAAACAGTTGGGGAAAATTCGACATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAAGGAAAAAGAGGGGAGAAGCTGCTTATTTATGATTATCTGCCTCTCAGAACTCTTCATGATCTTTTGCATGAGATTAAAGCAGGAAAACCAGTGCTGAACTGGGCCAGGAGACACAAAATTGCATTGGGTATAGCAAGAGGACTAGCATATCTTCACACAGGACTTGATGCTCCTATAACTCACGCAAACATACGATCCAAGAATGTTCTCGTGGACGACTTCTTCGTTGCCAGGGTCTCCGATTTTGCCCTAGATAAATTGATGATCCCTTCCATAGCTGACGAGATGGTGGCACTTGCCAAGACTGACGGCTACAAAGCACCGGAGCTTCAAAGAATGAAGAAATGTAACTCAAGGACCGACGTTTATGCGTTCGGTATATTACTTCTTGAAATCTTGATTGGTAAGAAGCCTGGTAAGAACGGAAGAAGCGGCGAGTATGTGGATTTACCTTCGATGGTGAAAGTAGCGGTTCTGGAGGAGACAACAATGGAAGTGTTCGATGTGGAACTGTTGAAAGGGATAAGAAGTCCGATGGAAGACGGTTTAGTTCAAGCACTGAAGCTAGCGATGGGATGTTGTGCACCGGTTGCATCGGTTAGACCGAGTATGGAAGAAGTTGTGAGGCAATTGGAGGAGAATAGACCAAGGAACAGGTCTGCCTTATACAGTCCTACTGAGACAAGAAGTGGAAGTATTACACCATTTTGA 2046 0.4022 MSSLKTLSSFYLLFFIFFFCNKASTKTTPPSTSSDIELLLFKIKPSLQGKTENLVLSSWNTSIPLCQWRGLKWVFTNGSSLSCTDLSSPQWNNLSFFKNPFLHLFSLQLPSANLSGSLPREIGQFPMLQSLYLNINSLTGTIPLELGYGSSLSEVDLSDNLLNGVLPPSIWNLCDKLLSLKLHGNSLSGSVSEPALPDSSCKFLQFLDLGGNKFSGNFPDFVTTFGALKELDLGNNMFSGVIPYGLVGLRLEKLNLSHNNFSGVVPFFGETSKFGVDAFEGNSPDLCGTPLQSCSKNSSLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKKKGSGDSEDELNDEEDDEENGGGNSVGGNGEGKLMLFPGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGGTIALRLLREGTCKDRTSCLAVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEIKAGKPVLNWARRHKIALGIARGLAYLHTGLDAPITHANIRSKNVLVDDFFVARVSDFALDKLMIPSIADEMVALAKTDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSITPF* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1353 681 SUPERFAMILY Protein kinase-like (PK-like) 390 657 IPR011009 -
Mtr7g1353 681 Pfam Protein tyrosine and serine/threonine kinase 385 656 IPR001245 GO:0004672|GO:0006468
Mtr7g1353 681 Pfam Leucine rich repeat 204 261 IPR001611 GO:0005515
Mtr7g1353 681 Gene3D Ribonuclease Inhibitor 202 295 IPR032675 -
Mtr7g1353 681 SUPERFAMILY L domain-like 66 267 - -
Mtr7g1353 681 Gene3D Phosphorylase Kinase; domain 1 370 457 - -
Mtr7g1353 681 MobiDBLite consensus disorder prediction 662 681 - -
Mtr7g1353 681 ProSiteProfiles Protein kinase domain profile. 381 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1353 681 MobiDBLite consensus disorder prediction 656 681 - -
Mtr7g1353 681 MobiDBLite consensus disorder prediction 330 360 - -
Mtr7g1353 681 Gene3D Transferase(Phosphotransferase) domain 1 459 673 - -
Mtr7g1353 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 5 681 - -
Mtr7g1353 681 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 5 681 - -
Mtr7g1353 681 Gene3D Ribonuclease Inhibitor 36 196 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1353 Mtr-Chr7 27874948 27878203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1353 7 681 Receptor kinase-like Gene Family AT3G24660 71.935 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr7g1353 PK_Tyr_Ser-Thr 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1353 - - gmx:100814814 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1353 7 27874948 27878203 Mtr7g1353 7 27874948 27878203 ECH