Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1350 ATGGTAGTGATAGAGCAAGAGAACACCGACGATCGAAGCGCGATTCCATCCAACGCCACTGCCGCCGGCAACGACGATTCCGACGGCTTCGAAACCGCCAGCGAAGCTGATCTCGATAGCGACTGCGATGACGGTGGAGATATCAGCCGAGAAGAACAGAAGAATCATGAGCAACCGAAGGAGCAAGAGGGAGAACAGGAACAAGATGTTGCTCAGAGAAGTGTTTCGTCTGAGAATGCGTTGATCAATGAAGAGGAATTGAAACAGAAAGCATTGAGTGAAGCAAATGAAGCAAAAGTAGAAGGTAACAAACTTTTTGTAGATGGGAAGTATGAGGAGGCTTTATCGCAATATGAGCATGCTTTACAAGTTGCGCCAGACATGCCTTCATCTGTGGAAATACGCTCAATATGCCATGCAAACCGTGCGGTGTGCTTTATGAAACTGGGAAAATATGAAAATACAATTAAAGAATGCACAAAAGCATTGGAACTGAATCCTGCATATGTTAAAGCTTTGGTGAGAAGAGGAGAGGCTCATGAAAAGCTTGAACATTTTGAAGAGGCAATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGGTCAAGCTGGGAAATCCATTCGCCGACTAGAGCCCCTTGCTGCTGTGAAACGGGAAAAAATGAAAGAAGAAATGATGGAAAAATTGAAAGAAATGGGAAATTCTGTATTGGGACGCTTTGGGATGAGCCTTGACAACTTCAAAGCAGTCAAAGATCCAAACACTGGTTCCTATTCTATCTCAATGGAACGCTAA 804 0.4353 MVVIEQENTDDRSAIPSNATAAGNDDSDGFETASEADLDSDCDDGGDISREEQKNHEQPKEQEGEQEQDVAQRSVSSENALINEEELKQKALSEANEAKVEGNKLFVDGKYEEALSQYEHALQVAPDMPSSVEIRSICHANRAVCFMKLGKYENTIKECTKALELNPAYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNGQAGKSIRRLEPLAAVKREKMKEEMMEKLKEMGNSVLGRFGMSLDNFKAVKDPNTGSYSISMER* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1350 267 ProSiteProfiles TPR repeat profile. 136 169 IPR019734 GO:0005515
Mtr7g1350 267 Coils Coil 81 101 - -
Mtr7g1350 267 ProSiteProfiles TPR repeat profile. 170 203 IPR019734 GO:0005515
Mtr7g1350 267 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 34 266 - -
Mtr7g1350 267 Pfam Tetratricopeptide repeat 171 203 IPR013105 -
Mtr7g1350 267 MobiDBLite consensus disorder prediction 10 27 - -
Mtr7g1350 267 MobiDBLite consensus disorder prediction 47 68 - -
Mtr7g1350 267 SUPERFAMILY TPR-like 93 208 IPR011990 GO:0005515
Mtr7g1350 267 ProSiteProfiles TPR repeat profile. 95 128 IPR019734 GO:0005515
Mtr7g1350 267 MobiDBLite consensus disorder prediction 30 46 - -
Mtr7g1350 267 Pfam Tetratricopeptide repeat 138 168 IPR001440 GO:0005515
Mtr7g1350 267 SMART tpr_5 95 128 IPR019734 GO:0005515
Mtr7g1350 267 SMART tpr_5 170 203 IPR019734 GO:0005515
Mtr7g1350 267 SMART tpr_5 136 169 IPR019734 GO:0005515
Mtr7g1350 267 Gene3D Tetratricopeptide repeat domain 49 235 IPR011990 GO:0005515
Mtr7g1350 267 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 34 266 - -
Mtr7g1350 267 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1350 Mtr-Chr7 27801939 27806029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1350 95 237 Calmodulin-binding Proteins AT3G25230 38.411 1.90e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1350 K24926 - gmx:100808386 358.221