Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1348 ATGGCTGAAGAGGAACAACCAAAGGATCTTAACTATATTCCAGAGGTTATATTGAAGAAGAGGAAACACAGTGAAGCATGGGCCCTGAGTAAAAAGGCGCAACTCCAGAAAAAAAGTTTCCAGCTCAGGAAGTCCAAGGACTTCATAAAAAAGCCTGAGGATTTCATTTTTGAATATCGCAACAGGGAGATTGACCTTATTAGAATGAAACGAAGGGTAAAGTGGAGACGGGGAGATAAATCGAAGCCAAGCAACAAGCCCATAATAGTCATTCGTATTCAGGGGAAACAAGACATGCATGCTACAACCAGAAAGCACTTATTCAGTTTGGGATTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGCCAACTGATGGAGTGATGGCCAAGCTGGCGAGAGTTGAACCATATGTCACCTATGGATATGCAAATCTTAAAACCATAAAGGAGCTGATTTACAAGAAGGGACATGCAAAAATAGATAAGCGAAAAGTTCCTTTGACAGACAATAACCTTATTGAGCAGGAATTGGGAAAGTTTGGTGTTGTATGCATAGAAGACATTGTGCATCAAATTGACAATGTTGGTCCACACTTCAAGGAAGTTGTCCGATTTATGTGGCCCTTTGAACTGAACAAGCCAGCAGATGGATTAAAAGGATTGAAAAACCGATACAAGGATGGTGGAGATTCAGGGGACCGTGAGGATCTCATCAATGAGCTCATCAATAAAATGAATTGA 741 0.4076 MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFIKKPEDFIFEYRNREIDLIRMKRRVKWRRGDKSKPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAVFVKPTDGVMAKLARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGKFGVVCIEDIVHQIDNVGPHFKEVVRFMWPFELNKPADGLKGLKNRYKDGGDSGDREDLINELINKMN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1348 246 CDD Ribosomal_L7_archeal_euk 88 246 IPR035808 -
Mtr7g1348 246 SUPERFAMILY Ribosomal protein L30p/L7e 89 246 IPR036919 -
Mtr7g1348 246 PANTHER 60S RIBOSOMAL PROTEIN L7-1 4 246 - -
Mtr7g1348 246 Pfam Ribosomal L30 N-terminal domain 13 74 IPR012988 -
Mtr7g1348 246 Gene3D - 191 246 IPR036919 -
Mtr7g1348 246 Gene3D - 88 190 IPR036919 -
Mtr7g1348 246 TIGRFAM uL30_euk: 60S ribosomal protein uL30 14 246 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mtr7g1348 246 Pfam Ribosomal protein L30p/L7e 89 138 IPR016082 -
Mtr7g1348 246 PANTHER 60S RIBOSOMAL PROTEIN L7 4 246 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1348 Mtr-Chr7 27782499 27786361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1348 1 246 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 50.806 6.17e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1348 K02937 - gmx:100306107 354.755