Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1321 ATGAAGCCAACTTTGGGTCAAGCTCAAAGTAACTGGGAAGCTGATAAAGTGCTTGATGTTTATATTCATGATTATTTTCTCAAAAGAAGGTTACACAACACTGCGAAAGCTTTTATGGCAGAAGGAAAGGTTTCAACTGATCCAGTAGCAATTGATGCACCTGGAGGATTTCTTTTTGAGTGGTGGTCCGTCTTTTGGGATATATTCATCTCGAGAACAAATGAGAAGCATTCTGAGGCTGCTGCATCTTACATTGAGCAAACAAAGGTGAGAGAACAGCCTCAAATTCAGCAATTGCAACGGATGCAACAGCGCAATGCACAATTACAACGAAGAGATCCTAATCATCCTGGACTGGGTGGTTCTTTGAACCCCATGAACTCTGAAGGTATGTTGGGGCAGCCACCAGCAGGTCAATTGGCCATGAAAATGTATGAAGCACGAATGAAACACCCTCATTCAATTGATGCAAATAGAATGGCTCTTCTCAAATCAGCAACAAGTCATCAAGGTCAGCTGGTTCATGGTAATTCAGGGAATATGTCTGCGGTATTGCAGCAAATGCAGGCACGGTCTGCTTTGAACAATGTCATCAAAAGAGAAGTTAAAATTGGTGCAAGTCCGATGAATTTTCCCATGGATTCATCAGTTTATCGGCAGTCGATTCTACAATCGAAATCTGGGTTAGGCAGAGCAGGATTAAATCAAGGTGTTACATGTCTTCCATTGAAGGGATGGCCTCTAAATGGAATTGGTCAACTAAGACCTGGTTTGGGTGTACAAGTTCCGAAGCCGAATTTAACATCGCAAAACCAATATCTTTTGGCATCACAACAACAACAGGTCTTGGCACAGGCTCAGGCACAACAAAACAGCCTTGGAAATTCTAATTATGGTGATATGGATCCACGCAGACTTTCTGGTCTTCCTCGAGGTAGCTTAAATCCAAAGGATGGTCAATCAAACTGGAATGATGGATCTATTTCCTCCCAAATGCAATCAGGTTCACCCAAGATGAAGATGGCCCAGACACAACAATCATTGTCTCAGCAGCAAGAGCAATTGCAGCAGCATCAACTGCAGCAGAGTAACAGAAAAAGAAAGCAAGCTTCTTCTTCTGGAGCTGCCAATAGCACTGGTACTCGAAACACAGCTGGTCCTTCACCTTATTCACCATCATCAACACATACACCTGGTGATGCATTGAATACAGCAAGCAGCATGGAACATGTTAACAATGTGCAAAAGAGCATGATGATGTATGGTACAGAAGCAACAGGAGGACTTAGATCATCTTCAAATTTACTTGATGATATAGATGGATTTGGAGATGTTGGTGCTTTAGATGATAATGTGGAGTCCTTTCTATCAAATGATGCAGGAGATGGTGGCAATCTCTATGGAACAATAAAACAAAGCCCAGCTGAGGAACAAAAAGACTCTTCAAAAACTTACACCTTTGCTGAATTTAGCTGCATAAGAACAAGGAACATAGTTACTTCTTGTCACTTTTCTTCCGATGGAAAGTTGCTTGCCAGTGCTGGAGAAGACAAAAAGGTGACCCTGTGGAATATGGACTCTCTGCGGACAGAGCACACTCCTGAAGAACACAAGTTAGTTATTACAGATGTCCGTTTTAGACCAAATTCATCTCAGTTGGCAACAGCCTCATGTGACAAATCTGTGCGGTTATGGGACGCAGTCAATCCAACCTATTGTGTTCAAGAATATAGCGGGCACAGTTCAGCCATTATGTCCCTTGATTTTCACCCTAAGAAAACTGATATTTTCTGCTTCTGCGATAATGAAAATGAAATTCGGTACTATAACATTACTTCATCCTCGTGTACCCGTGTATCCAAGGGAGGTAATGCAAAAGTGAGGTTTCAGCCTGGATCGGGACAGTTACTTGCTGCAGCTTCTGATAAAGTAGTGTCTATTTTTGATGTTGAAACTGACAGACAAATTTACTCACTCCAGGGTCATCCTGAACCGGTGAACAATATTTGCTGGGATACTACTGGAGATATGCTGGCATCTATTAGTCCAAATTTGGTGAAGATATGGAATTTGACCTCAGGAGAATGCGTTCAGGAGCTCAACTCTACTGGGAACCAGTTTTATTCTGGTCTCTTTCATCCAAGCTATGCAACTTTATTAGTAGTGGGAGGGATTTCGTCCTTAGAGTTGTGGAACATGGCTGAGAACAAAAGCATGACAATTCCTGCACATGAGAATGTGATTTCTGCTTTGGCTGAGTGTGCTGCTACTGGAATGGTTGCCTCTGCCAGTCGTGACAACTCTGTAAAGTTGTGGAAATAA 2322 0.4229 MKPTLGQAQSNWEADKVLDVYIHDYFLKRRLHNTAKAFMAEGKVSTDPVAIDAPGGFLFEWWSVFWDIFISRTNEKHSEAAASYIEQTKVREQPQIQQLQRMQQRNAQLQRRDPNHPGLGGSLNPMNSEGMLGQPPAGQLAMKMYEARMKHPHSIDANRMALLKSATSHQGQLVHGNSGNMSAVLQQMQARSALNNVIKREVKIGASPMNFPMDSSVYRQSILQSKSGLGRAGLNQGVTCLPLKGWPLNGIGQLRPGLGVQVPKPNLTSQNQYLLASQQQQVLAQAQAQQNSLGNSNYGDMDPRRLSGLPRGSLNPKDGQSNWNDGSISSQMQSGSPKMKMAQTQQSLSQQQEQLQQHQLQQSNRKRKQASSSGAANSTGTRNTAGPSPYSPSSTHTPGDALNTASSMEHVNNVQKSMMMYGTEATGGLRSSSNLLDDIDGFGDVGALDDNVESFLSNDAGDGGNLYGTIKQSPAEEQKDSSKTYTFAEFSCIRTRNIVTSCHFSSDGKLLASAGEDKKVTLWNMDSLRTEHTPEEHKLVITDVRFRPNSSQLATASCDKSVRLWDAVNPTYCVQEYSGHSSAIMSLDFHPKKTDIFCFCDNENEIRYYNITSSSCTRVSKGGNAKVRFQPGSGQLLAAASDKVVSIFDVETDRQIYSLQGHPEPVNNICWDTTGDMLASISPNLVKIWNLTSGECVQELNSTGNQFYSGLFHPSYATLLVVGGISSLELWNMAENKSMTIPAHENVISALAECAATGMVASASRDNSVKLWK* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1321 773 CDD WD40 496 773 - -
Mtr7g1321 773 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 741 773 - -
Mtr7g1321 773 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 9 773 IPR044716 GO:0003714
Mtr7g1321 773 Pfam WD domain, G-beta repeat 655 690 IPR001680 GO:0005515
Mtr7g1321 773 Pfam WD domain, G-beta repeat 498 524 IPR001680 GO:0005515
Mtr7g1321 773 Pfam WD domain, G-beta repeat 532 566 IPR001680 GO:0005515
Mtr7g1321 773 SUPERFAMILY WD40 repeat-like 495 773 IPR036322 GO:0005515
Mtr7g1321 773 Gene3D - 468 625 IPR015943 GO:0005515
Mtr7g1321 773 MobiDBLite consensus disorder prediction 314 404 - -
Mtr7g1321 773 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Mtr7g1321 773 ProSiteProfiles Trp-Asp (WD) repeats profile. 499 533 IPR001680 GO:0005515
Mtr7g1321 773 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 9 773 - -
Mtr7g1321 773 ProSiteProfiles Trp-Asp (WD) repeats profile. 534 566 IPR001680 GO:0005515
Mtr7g1321 773 Coils Coil 341 361 - -
Mtr7g1321 773 ProSitePatterns Trp-Asp (WD) repeats signature. 511 525 IPR019775 -
Mtr7g1321 773 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 534 566 - -
Mtr7g1321 773 SMART WD40_4 652 690 IPR001680 GO:0005515
Mtr7g1321 773 SMART WD40_4 489 524 IPR001680 GO:0005515
Mtr7g1321 773 SMART WD40_4 693 732 IPR001680 GO:0005515
Mtr7g1321 773 SMART WD40_4 613 649 IPR001680 GO:0005515
Mtr7g1321 773 SMART WD40_4 734 773 IPR001680 GO:0005515
Mtr7g1321 773 SMART WD40_4 570 610 IPR001680 GO:0005515
Mtr7g1321 773 SMART WD40_4 527 566 IPR001680 GO:0005515
Mtr7g1321 773 MobiDBLite consensus disorder prediction 286 404 - -
Mtr7g1321 773 ProSiteProfiles Trp-Asp (WD) repeats profile. 659 699 IPR001680 GO:0005515
Mtr7g1321 773 Pfam LisH 18 42 IPR006594 GO:0005515
Mtr7g1321 773 Gene3D - 626 773 IPR015943 GO:0005515
Mtr7g1321 773 PRINTS G protein beta WD-40 repeat signature 511 525 IPR020472 -
Mtr7g1321 773 PRINTS G protein beta WD-40 repeat signature 553 567 IPR020472 -
Mtr7g1321 773 PRINTS G protein beta WD-40 repeat signature 760 773 IPR020472 -
Mtr7g1321 773 ProSiteProfiles Trp-Asp (WD) repeats profile. 741 773 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1321 Mtr-Chr7 27477604 27490932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1321 572 772 Miscellaneous Gene Families AT5G08390 21.359 7.07e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Mtr7g1321 WD40 0.063 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1321 - - gmx:100799686 1102.04