Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1301 ATGTCTCTTTCAAGAGCCAATGATACTGAGATGAAGGAATCTGCAACAACAGGAGCACCTTCATCTTCATCTTCTTCATGGAATAGGTTACCTCCTATGCCTCCAAATAGATTTGAAGATAGCGATGAAGATCTATTTGAAGTTCCGGATGTGGAAGGTACACAATGTCAAAGTGTCCATTCTGAGTTAACAAATCAAAATAGTAACCACAATCAAAGCAATGTAACTGATGCTCAACTTCAAGCTGGCTTCCCCGGAAAGCGCCGCCGCGGAAGAAACCCGGCAGACAAGGAACATAGACGTCTCAAAAGGTTGCTAAGGAATAGGGTCTCGGCCCAACAAGCCCGTGAAAGAAAAAAACTGTACGTGAATGACTTAGAATCAAGAGCTAAAGAGTTTGAAGATAAGAACTCCAATTTAGAAGAACGTATCTCAACTTTGACCAATGAAAACACCATGCTCCGAAAGGTTCTTATGAACACTAGACCCAAAGTTGATGAGAGCAATGAAGGTTAG 516 0.4186 MSLSRANDTEMKESATTGAPSSSSSSWNRLPPMPPNRFEDSDEDLFEVPDVEGTQCQSVHSELTNQNSNHNQSNVTDAQLQAGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKLYVNDLESRAKEFEDKNSNLEERISTLTNENTMLRKVLMNTRPKVDESNEG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1301 171 CDD bZIP_HY5-like 110 151 - -
Mtr7g1301 171 Coils Coil 116 157 - -
Mtr7g1301 171 SUPERFAMILY Leucine zipper domain 100 159 IPR046347 GO:0003700|GO:0006355
Mtr7g1301 171 MobiDBLite consensus disorder prediction 1 101 - -
Mtr7g1301 171 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 8 170 IPR044280 GO:0000981|GO:0045944
Mtr7g1301 171 MobiDBLite consensus disorder prediction 54 80 - -
Mtr7g1301 171 MobiDBLite consensus disorder prediction 1 31 - -
Mtr7g1301 171 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 8 170 - -
Mtr7g1301 171 Gene3D Single helix bin 119 160 - -
Mtr7g1301 171 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 161 IPR004827 GO:0003700|GO:0006355
Mtr7g1301 171 Pfam bZIP transcription factor 97 156 IPR004827 GO:0003700|GO:0006355
Mtr7g1301 171 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 103 118 IPR004827 GO:0003700|GO:0006355
Mtr7g1301 171 SMART brlzneu 96 160 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1301 Mtr-Chr7 27049768 27052652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1301 79 167 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 74.444 8.66e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr7g1301 bZIP_1 1.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1301 K16241 - gmx:100783826 218.009