Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1280 ATGGAGAATTTCCATATAATGTTTTTCCTCAAATTTGTAGTTTATGTTCTACTTTATGATGGTATTGAAACTCTAATCTCCAAAGACGGTAACTTCACTTTTGGATTCTTTAGCCCTAAAAATTCTACAAACCGCTACGTTGGAATTTGGTGGAAGTCTCAATCTACAATCATATGGGTGGCAAACAGAAACCAACCACTGAATGACTCTAATGGGATTGTCACGATATCTGAAGATGGAAATCTTGTGGTATTAAATGGACAGAAACGAGTCATTTGGTCATCAAATGTTTCCAACATAGCAACAAATACAAGTTCTTGCTTTTCGGGTTTCGGTAACCTTGTGCTTCTGGAGAACACAACCGGAAAAAACTTATGGCAGAGTATTCTGCAGCCTTCAGATACATTCCTTCCAGGAATGAAAATTTCAAACAACAAAAGAACCGGTAAGAATGAAAAACTCACATCATGGAAAAGCCCTTCTGACCCCTCTGTTGGCAACTTCTCTGCTAGTACTGTTGAACGCCTAAGTATACTTGAAGTGTTTATTTGGAATGGAACTCGGCCATTTTGGCGCAGTGGTCCTTGGAATGGCAGGGTCTTTACAGGGATACAAAAAATGGAATTTGTATATACTAATACTTTTCAAGGTGGAGATGATGGAGAAGGAAATAATGTTATATTTTATACGCAACCAAATGACACGGAAATAAGGATCTATCACCTGAATTCAAAAGGAATATTTGAAAAAATGTGGTGGGATGATCAGAATAAAGAAATGAAAGTGAGATGGAAAAGCCAAAACGCAGAATGTGATGTTTATGGTCTATGTGGAGATTTTACAAGCTGTAATTCATTGAGCTCACCAGTTTGCAGTTGTTTGAAAGGATTTGAACCCAGAAATACTCGTGAATGGAGTAGAAACAACTGGACTGGCGGGTGTGTTAGGCAGAGACCTTTGCTGTGTAAAAGGGTCACCAATAAAACCACAAGTAGAAAGGAAGATGGGTTTCTGAAACTACAGATGGTTAAAGTTCCAGATTTTGCTGAAGGTTTAGCAGTTACACCTGACACATGCAGAATCTTATGTTTAGAGAATTGCTCTTGTGTTGCGTATTCTCATCATGATGTGATTGGCTGTATGTCTTGGACCGGCAATCTACTTGACATAGAACAATTCGAAATTGGAGGACTTGACCTATATGTTCGCGTATCCTATTTAGAACTTGATAGGAGAAATAAGACAATCTTCATCGCAAGTACAGGGATAATTGCAACTCTTATTATTATCATTTGCGCATATACCACATGGAGAAGGATATCAAACCACTCAGCTAATTCTAGTGACAACATAATTGGAGAAATGTCGCAAGATAAACTACAAGAGCTATTAAAATTTGATTTTGAAAAAGTTGCAACTGCCACAAACAACTTTGACCTGTCAAACAAACTTGGACAGGGTGGTTTTGGTCCCGTATACAAGGGGAAACTGCAAGATGGTCGAGACATAGCAGTTAAAAGGCTTTCTAGAGCATCTGGACAAGGGTTGGAGGAATTCATGAACGAAGTATTGGTGATTTGTAAGCTTCAACATCGCAACCTTGTAAGGCTTATTGGCTGTTGTGTTGAAGGTGATGAAAAGATGTTGATGTATGAATACATGCCAAACAAAAGTTTGGATGCATTTATCTTTGATCCATCAAAAAACAAACTCCTGGATTGGAGGACACGGTGTAACATCATAGAAGGAATTGCTCGAGGGTTGCTATATCTTCACAGAGATTCTAGGCTAAGAATTATTCATAGAGATTTGAAGGCAAGTAATGTCCTGTTAGATGAGGAGTTGAATCCAAAAATATCAGACTTTGGTCTGGCTAGAATATTTGGAGGAGGTGAAGATCAGGCCAATACTAGAAGGATTGTCGGAACTTATGGCTACATGTCTCCTGAATATGCAATGCAAGGATTATTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTATTGCTACTAGAGATTGTTATCGGAAGAAGAAACTCAAGTTTTTATGATGATGAGCATAATCTTAGCCTTTTAGGATATGTATGGACACAATGGAGTGAAGACAATATTTTGTCTCTAATAGATCAAGAAATATATGATCATAGTCATCATAATTATATTTCAAGGTGCATACATATAGGACTATTGTGTGCACAAGAACTTGCCAAAGATAGGCCCACTATGGCTGCAGTAATTTCTATGCTTAACAGTGAAACTTCATTACTTCCTCCTCCTAGTAAACCTGCATTCATCCTGAGGGAGAATATGTTAAATTCAAAGTTAGCTGAAGAATGTCAAAATGGTTGTTCCGTCAATAATGTCAGTATTACAGACATCAGTGGCAGATAG 2391 0.3777 MENFHIMFFLKFVVYVLLYDGIETLISKDGNFTFGFFSPKNSTNRYVGIWWKSQSTIIWVANRNQPLNDSNGIVTISEDGNLVVLNGQKRVIWSSNVSNIATNTSSCFSGFGNLVLLENTTGKNLWQSILQPSDTFLPGMKISNNKRTGKNEKLTSWKSPSDPSVGNFSASTVERLSILEVFIWNGTRPFWRSGPWNGRVFTGIQKMEFVYTNTFQGGDDGEGNNVIFYTQPNDTEIRIYHLNSKGIFEKMWWDDQNKEMKVRWKSQNAECDVYGLCGDFTSCNSLSSPVCSCLKGFEPRNTREWSRNNWTGGCVRQRPLLCKRVTNKTTSRKEDGFLKLQMVKVPDFAEGLAVTPDTCRILCLENCSCVAYSHHDVIGCMSWTGNLLDIEQFEIGGLDLYVRVSYLELDRRNKTIFIASTGIIATLIIIICAYTTWRRISNHSANSSDNIIGEMSQDKLQELLKFDFEKVATATNNFDLSNKLGQGGFGPVYKGKLQDGRDIAVKRLSRASGQGLEEFMNEVLVICKLQHRNLVRLIGCCVEGDEKMLMYEYMPNKSLDAFIFDPSKNKLLDWRTRCNIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDEELNPKISDFGLARIFGGGEDQANTRRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVIGRRNSSFYDDEHNLSLLGYVWTQWSEDNILSLIDQEIYDHSHHNYISRCIHIGLLCAQELAKDRPTMAAVISMLNSETSLLPPPSKPAFILRENMLNSKLAEECQNGCSVNNVSITDISGR* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1280 796 SMART serkin_6 478 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1280 796 Pfam PAN-like domain 332 390 IPR003609 -
Mtr7g1280 796 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 22 787 - -
Mtr7g1280 796 ProSiteProfiles PAN/Apple domain profile. 322 405 IPR003609 -
Mtr7g1280 796 SMART ntp_6 332 404 IPR003609 -
Mtr7g1280 796 Gene3D Phosphorylase Kinase; domain 1 439 553 - -
Mtr7g1280 796 CDD PAN_AP_plant 319 405 - -
Mtr7g1280 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 48 163 IPR036426 -
Mtr7g1280 796 Pfam D-mannose binding lectin 56 158 IPR001480 -
Mtr7g1280 796 SUPERFAMILY Protein kinase-like (PK-like) 462 768 IPR011009 -
Mtr7g1280 796 ProSiteProfiles Bulb-type lectin domain profile. 10 129 IPR001480 -
Mtr7g1280 796 Pfam Domain of unknown function (DUF3403) 751 796 IPR021820 GO:0004674
Mtr7g1280 796 PANTHER - 22 787 - -
Mtr7g1280 796 CDD STKc_IRAK 484 750 - -
Mtr7g1280 796 Pfam S-locus glycoprotein domain 191 300 IPR000858 GO:0048544
Mtr7g1280 796 Gene3D - 18 129 IPR036426 -
Mtr7g1280 796 PIRSF SRK 12 796 IPR024171 GO:0004674
Mtr7g1280 796 SMART blect_4 15 132 IPR001480 -
Mtr7g1280 796 Gene3D Transferase(Phosphotransferase) domain 1 554 755 - -
Mtr7g1280 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Mtr7g1280 796 ProSiteProfiles Protein kinase domain profile. 478 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1280 796 CDD B_lectin 16 128 IPR001480 -
Mtr7g1280 796 Pfam Protein tyrosine and serine/threonine kinase 480 749 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1280 Mtr-Chr7 26733636 26737636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1280 412 767 Receptor kinase-like Gene Family AT4G05200 52.210 4.26e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr7g1280 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1280 - - mtr:MTR_7g056623 1576.61