Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1279 ATGCGAATAATCTCCCTTATGGATTTCAGCTACCGTGAAAATCTGTTTTCTGTTTTATTCATTTTGTGTTGCTATTTGGTACATGTTAGTGTTGGTATAGACACCATCACATCATCTCAATTTATCAAAGACCCTGAAACTCTAATCTCCAAAGATGGTAACTTCACCTTTGGATTCTTTAGCCCTAAAAATTCTACAAACCGCTACGTTGGAATTTGGTGGAAGTCTCAATCTACAATCATATGGGTTGCAAACAGAAACAAACCACTGAATGATTCTAATGGGATTGTCACAATATCTGAACATGGAAATCTCGTGGTATTAAATGGACAGAAACAAGTCATTTGGTCATCGTATGTTTCCAACATAGTATCCAATACCACCTCCCAAATGTCTGACTCTGGTAACCTTGTGCTTCTGGAGAGCACAACTGGAAACAACTTATGGCAGAGTTTTCAGCAGCCTTCAGATACATTCCTTCCAGGCATGAAACTTTCAGTCAACAAAAGAACTGGTAAGAGTATAAAACTCACATCATGGAAAAGCCCTTCTGACCCCTCTGTTGGCAACTTCTCTTGTAATAGCGTTCAACGCCAAAATATATTTGAAGTGTTTATTTGGAATGAAACTCGGCCATGTTGGCGCAGTGGTCCTTGGAATGGTGGGGTCTTCACAGGAATACAAATAATGAAACTTTCATATCGTAATACTTTTCAAGGTGGAGATGACGGAGAAGGAAATATTGTTATATTTTATACAATACCAAATGACAAGGAACTGATGATCTATCACCTGAATTCAGAAGGAATATTGGAAGAAATATGGTGGGATGATCAGAAGAAAGAAATGATGGTGGCATGGAAAAGCCAATACTCAGAGTGTGATGTTTATGGTCTATGTGGGGCATTTACAAGCTGTAATTCATTGAGCACGCCAATTTGCAGCTGTTTGAAAGGGTTTGATCCGGTGAACATACAGGAATGGAATAGAAACAACTGGACTGGCGGGTGTGTTAGGCGGAAACCATTGCAGTGTAAAAGGATCGGCAATAAAACCACAGGTAGAAAGGAAGACGGGTTTTTGAAACTACAGATGGTTAAAGTTCCAGATTTTGCTGAAGGTTTAGAAGGGACACCTGACAGATGCAGAATCTTATGTTTGGAGAATTGCTCTTGTGTTGCGTATTCTCATGATGATGGGATTGGCTGTATGTCTTGGACCGGCAATCTACTTGACATACAACAATTCCAAAGTGGAGGACTTGACCTATATGTTCGCGTATCCTATTTAGAACTTGATAAATGGAGAAACAAGACAATCTTCATCGCAATTACAGTGATAATTGCAACTCTTATTATTGTCATTTGTGCATATATCACGTGGAGAAGGACATCAAACCGCCCAGCTAATTCTAATGACAACATAATTGGAGAAATGTCCCAAGATAAACTACAAGAGCTATTAAAATTTGATTTTGAAAAAGTTGCAACTGCCACAAACAACTTTGACCTGTCTAACAAACTTGGACAGGGTGGTTTTGGTCCCGTATATAAGGGGAAACTGCAAGATGGTCGAGAAATAGCAATTAAAAGGCTTTCTAGAGCATCTGGACAAGGGTTGGAGGAATTCATGAACGAAGTAGTGGTAATTTGTAAGCTTCAACACCGCAACCTTGTAAGACTTATTGGCTGTTGTGTTGAAGGTGATGAAAAGATGTTGATGTATGAATACATGCCAAACAAAAGTTTGGATTCATTCATCTTTGATCCATCAAAAAACAAACTCCTAGATCGGAGGACACGGTATAGCATTATAGAAGGAATTGCTCGAGGGTTGTTATATCTTCACAGAGATTCTAGGCTAAGAATTATTCATAGAGGTTTGAAGGCAAGTAATGTCCTGTTAGATGAGAAGTTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGAGGTGAAGATCAGGCCAATACCAGAAGGATTGTCGGAACAATGGGTTACATGTCTCCTGAATATGCAATGCAAGGATTATTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTATTGCTACTAGAGATTGTTATCGGAAGAAGAAACTCAAGTTTTTATGACGATGTGCATAATCTGAGCCTTTTAGGATATGTATGGACACAATGGAGTGAAGACAATATTTTGTCTCTAATAGATCAAGAAATATATGATCATAGTCATCATAATTATATTTCAAGGTGCATACATATAGGACTATTGTGTGCACAAGAACGTGCCGGAGATAGGCCCACTATGGCTTCAGTAATTTCTATGCTTAACAGTGAAAGTTCATTACTTCCTCCTCCTAGTAAACCTGCATTCATTCTGTGGGAGAGTATGTTAAATTCAAAGTTTCCTGAAGAATGTCAAAATGGTTGTTCCATCAATAATGTCAGTATCACAGACATCAGTGGCAGATAG 2463 0.3845 MRIISLMDFSYRENLFSVLFILCCYLVHVSVGIDTITSSQFIKDPETLISKDGNFTFGFFSPKNSTNRYVGIWWKSQSTIIWVANRNKPLNDSNGIVTISEHGNLVVLNGQKQVIWSSYVSNIVSNTTSQMSDSGNLVLLESTTGNNLWQSFQQPSDTFLPGMKLSVNKRTGKSIKLTSWKSPSDPSVGNFSCNSVQRQNIFEVFIWNETRPCWRSGPWNGGVFTGIQIMKLSYRNTFQGGDDGEGNIVIFYTIPNDKELMIYHLNSEGILEEIWWDDQKKEMMVAWKSQYSECDVYGLCGAFTSCNSLSTPICSCLKGFDPVNIQEWNRNNWTGGCVRRKPLQCKRIGNKTTGRKEDGFLKLQMVKVPDFAEGLEGTPDRCRILCLENCSCVAYSHDDGIGCMSWTGNLLDIQQFQSGGLDLYVRVSYLELDKWRNKTIFIAITVIIATLIIVICAYITWRRTSNRPANSNDNIIGEMSQDKLQELLKFDFEKVATATNNFDLSNKLGQGGFGPVYKGKLQDGREIAIKRLSRASGQGLEEFMNEVVVICKLQHRNLVRLIGCCVEGDEKMLMYEYMPNKSLDSFIFDPSKNKLLDRRTRYSIIEGIARGLLYLHRDSRLRIIHRGLKASNVLLDEKLNPKISDFGMARIFGGGEDQANTRRIVGTMGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVIGRRNSSFYDDVHNLSLLGYVWTQWSEDNILSLIDQEIYDHSHHNYISRCIHIGLLCAQERAGDRPTMASVISMLNSESSLLPPPSKPAFILWESMLNSKFPEECQNGCSINNVSITDISGR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1279 820 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Mtr7g1279 820 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
Mtr7g1279 820 SMART blect_4 39 155 IPR001480 -
Mtr7g1279 820 Pfam D-mannose binding lectin 79 181 IPR001480 -
Mtr7g1279 820 ProSiteProfiles Protein kinase domain profile. 502 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1279 820 Pfam Protein tyrosine and serine/threonine kinase 504 773 IPR001245 GO:0004672|GO:0006468
Mtr7g1279 820 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 818 - -
Mtr7g1279 820 Gene3D - 28 153 IPR036426 -
Mtr7g1279 820 SUPERFAMILY Protein kinase-like (PK-like) 486 796 IPR011009 -
Mtr7g1279 820 CDD PAN_AP_plant 342 428 - -
Mtr7g1279 820 CDD B_lectin 39 155 IPR001480 -
Mtr7g1279 820 SMART ntp_6 355 427 IPR003609 -
Mtr7g1279 820 CDD STKc_IRAK 508 774 - -
Mtr7g1279 820 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Mtr7g1279 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 186 IPR036426 -
Mtr7g1279 820 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Mtr7g1279 820 ProSiteProfiles Bulb-type lectin domain profile. 33 152 IPR001480 -
Mtr7g1279 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 27 818 - -
Mtr7g1279 820 PIRSF SRK 6 820 IPR024171 GO:0004674
Mtr7g1279 820 Pfam PAN-like domain 355 413 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1279 Mtr-Chr7 26718651 26722444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1279 431 800 Receptor kinase-like Gene Family AT4G05200 51.862 2.02e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr7g1279 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1279 - - mtr:MTR_7g056623 1342.41