Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1276 TTTACAACTGGAAACATTTTATGGCAAAGTATTCAGCAACCTACAGATACATTACTGCCTAGTATGAAGCTTTCAATCAACAAAAGAACAAGTAAGAGTGTAAATCTCGAAGCATGGAAAAGCCCTTCTGACCCATCTGTTGGCAACTTCTATAGTAGTATTTTTGAACGCCCCCCAAATATAATTGAAGTGTTCATTTGGAATGGAAGTCGACCATATTGGCGAAGTGGACCGTGGAATGGCGAGGTCTTCACTGGAATACAGTCAATGATAGATTCATATTTTTTTGGTTTTCGAGGAGGAGATGATGGAGAAGGGAATATTTACATATATTATGCAGTACAAAATGATGATGAATTTTTTATCTATAACCTAAATTCAAAAGGAGAATTAGAAGAAACGGGGTGGGATGATGAGAAGAAAGAAGTGCAAGTTCTATGGACAAGTCGGGAATCAAAGTGTGATGTTTACGACTTATGTGGGGCATTTGCAAGTTGTAATTCATTGAGCTCACCAACATGTAGCTGTTTGAGAGGGTTTGAACCCAGAAACATAGAACAATGGAATATACATAACTGGACCGGTGGGTGTGTTCGAAGGACACCTTTGCAGTGTGAAAGGGTCAACAATAAAACCACAAGTACAAAGGAAGATGGGTTTTTGAAACTACAAATGATTAAAGTTCCAGATTTTGCTGAAGGTTTGACTGTTACATCAGACATATGCAGAAGCCTATGCTTGGAGAATTGCTCTTGCCTTGCATATTCTCATGATGATGGGATTGGTTGTATGTCTTGGACCGGCAATCTACGTGACATACAACAATTTCAAAGAGGAGGACTTGATCTATATGTTCGCGTAGCCAATGGAGAACTTGATAGAGGGAGAAACAAGACGATCATCATTATAGGTACAACAATAATTGGAACCCTCATGATTGTCATCTGTGCATATATCTTCTGGAGAAGGACATCAAACCACCCAGATATTATACAATCATCATGTATTCAACTTTACAACAAAGCTTCCAATAAAGGTGGATCACCAGAAGATTATGCTAGCGACAACGTAATTGGAGAAATGTCGCAAATCAAACTACAAGAGCTATTAAAATTTGATTTTGAAAAACTTGCAACTGCCACAAACAACTTCCACTTTTCCAACAAACTTGGACAAGGTGGTTTTGGTCCCGTATACAAGGGGAAACTGCAAGATGGTCGGGAAATAGCAGTTAAAAGACTTTCAAGAGCATCTGGTCAAGGGCTGCAGGAGTTCATGAATGAAGTAGTGGTTATTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTGTTGGTTGCTGTATTGAAGGCGATGAAAAGATGTTGATGTATGAGTACATGCTAAACAGAAGTTTGGATGCATTCATCTTTGATCCATCAAAAAATAAACTCCTAGATTGGAGGACACGGTACAACATAATAGAAGGAATAGCTCGTGGATTGCTATATCTCCACAGAGATTCCAGACTAAGAATTATTCATAGAGATTTGAAGGCAAGTAATGTCTTGTTAGATGAGGAGTTGAATCCAAAAATATCAGAATTTGGTATGGCTAGAATCTTTGGAGGAGGTGAAGATCAGGCCAATACTAGCAGGATTGTTGGAACTTATGGCTATATGTCTCCCGAGTATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGTGTTTTGATATTAGAGATTGTTACCGGGAGAAGGAACTCAAGTTTTTACGAAAATGAACATGCTCTGAGCCTTTTGGGATATGTATGGATACAATGGAGGGAAGACAACATTTTATCTCTAATAGATCAAGGAATATATGATCCTAGTCATCATAATTATATTTCAAGGTGCATACATATAGGACTATTGTGTGCACAAGAACTTGCCAAAGATAGGCCCGCTATGGCTGCAGTAATTTCTATGCTTAACAGTGAAACTGCATCACTTCCTCCTCCCAGTAAACCTGCATTCATCCTGAGGGAGAGTATGTTAAATTCAAAGTTTCCTGAAGAATGTCAAAATGGTTGTTCCATCAATAATGTCAGTATCACAGACGTCTGTGGAAGATAG 2109 0.385 FTTGNILWQSIQQPTDTLLPSMKLSINKRTSKSVNLEAWKSPSDPSVGNFYSSIFERPPNIIEVFIWNGSRPYWRSGPWNGEVFTGIQSMIDSYFFGFRGGDDGEGNIYIYYAVQNDDEFFIYNLNSKGELEETGWDDEKKEVQVLWTSRESKCDVYDLCGAFASCNSLSSPTCSCLRGFEPRNIEQWNIHNWTGGCVRRTPLQCERVNNKTTSTKEDGFLKLQMIKVPDFAEGLTVTSDICRSLCLENCSCLAYSHDDGIGCMSWTGNLRDIQQFQRGGLDLYVRVANGELDRGRNKTIIIIGTTIIGTLMIVICAYIFWRRTSNHPDIIQSSCIQLYNKASNKGGSPEDYASDNVIGEMSQIKLQELLKFDFEKLATATNNFHFSNKLGQGGFGPVYKGKLQDGREIAVKRLSRASGQGLQEFMNEVVVICKLQHRNLVRLVGCCIEGDEKMLMYEYMLNRSLDAFIFDPSKNKLLDWRTRYNIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDEELNPKISEFGMARIFGGGEDQANTSRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVTGRRNSSFYENEHALSLLGYVWIQWREDNILSLIDQGIYDPSHHNYISRCIHIGLLCAQELAKDRPAMAAVISMLNSETASLPPPSKPAFILRESMLNSKFPEECQNGCSINNVSITDVCGR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1276 702 ProSiteProfiles PAN/Apple domain profile. 205 288 IPR003609 -
Mtr7g1276 702 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 80 IPR036426 -
Mtr7g1276 702 Pfam S-locus glycoprotein domain 74 183 IPR000858 GO:0048544
Mtr7g1276 702 Pfam D-mannose binding lectin 3 40 IPR001480 -
Mtr7g1276 702 CDD PAN_AP_plant 201 288 - -
Mtr7g1276 702 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 699 - -
Mtr7g1276 702 CDD STKc_IRAK 390 656 - -
Mtr7g1276 702 Gene3D Transferase(Phosphotransferase) domain 1 460 662 - -
Mtr7g1276 702 SMART serkin_6 384 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1276 702 SMART ntp_6 215 287 IPR003609 -
Mtr7g1276 702 Pfam Protein tyrosine and serine/threonine kinase 385 655 IPR001245 GO:0004672|GO:0006468
Mtr7g1276 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Mtr7g1276 702 Gene3D Phosphorylase Kinase; domain 1 350 459 - -
Mtr7g1276 702 ProSiteProfiles Protein kinase domain profile. 384 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1276 702 SUPERFAMILY Protein kinase-like (PK-like) 372 674 IPR011009 -
Mtr7g1276 702 PIRSF SRK 1 702 IPR024171 GO:0004674
Mtr7g1276 702 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 699 - -
Mtr7g1276 702 Pfam PAN-like domain 215 273 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1276 Mtr-Chr7 26645811 26648719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1276 290 682 Receptor kinase-like Gene Family AT4G05200 49.492 2.50e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr7g1276 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1276 - - mtr:MTR_7g056623 1080.47