Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1242 ATGCCCTTCAGCATCAAGTTATGGATATTCATACAGCTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCCGAGAAAGAGGAAGAAATTGCAAAGAACTTGAAAAAGTATAGTAAGAAATATGAAGCAGAGATTAAAGATGTTTCGTTGCAGCAGAGTGAGCAGGAGCGTGAGAAGCGTAGGATCTTGAAAGAAGATTGGGAGAAGTGGGTCAACGAATGGAAGCTGATGCATGAAGAAGAGAAGTTAGAGAGTCAAAATCTGAGGGACAGAGAAGCTAGTGACAAGGAAGAGGAATATGAGGCAAAGGACATTGAAGTCGAGGAGGAAGTAGTCGAAGTTAACAAAGAAATCCTTCACTTTGAGTATGAGCGAGAGTGCGGTAGTGAAGTATGTAACTTACTGGACTGGAGTTTGTGGTAG 426 0.4249 MPFSIKLWIFIQLLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEIKDVSLQQSEQEREKRRILKEDWEKWVNEWKLMHEEEKLESQNLRDREASDKEEEYEAKDIEVEEEVVEVNKEILHFEYERECGSEVCNLLDWSLW* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1242 141 PANTHER BNACNNG51870D PROTEIN 10 120 - -
Mtr7g1242 141 Coils Coil 32 59 - -
Mtr7g1242 141 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 10 120 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1242 Mtr-Chr7 26159072 26159497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1242 10 121 Eukaryotic Initiation Factors Gene Family AT5G27640 69.912 9.63e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1242 K03253 - mtr:MTR_7g056267 246.899