Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1194 ATGAACGACGACTTCGAAATTCCACAAGCTGAAGAAATGAACGAAGACTTCGATCTTCCAGAAGAGAAGGTAGGCGATGAGAGAGAAGTCGGCGATCGTGGTCTCAAGAAGAAGCTTCTCAAACTTGGTGAAGGTTGGGATACTCCTGAATCCGGTGATGAAGTTCAAGTTCACTACACTGGAACTTTGCTTGATGGAACTAAATTTGATTCAAGTCGTGATAGAGATTCTCCTTTCAGCTTCACGCTTGGACAAGGGCAAGTAATTCAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCACTCTTCACCATCCCTCCCGAGCTAGCTTATGGTGAATCTGGTTCACCTCCGACAATTCCTCCTAATGCGACGCTCCAATTTGATGTTGAGATGTTGTCTTGGACCAGTGTGAAGGACATATGTAAAGATGGTGGTATATTTAAGAGGATACTTAAAGAGGGGGAGAAATGGGAGAACCCCAAGGATCCTGATGAAGTATTGGTTAATTATGAGGTTCGTCTGGAGGATGGAAAGGCTGTAGCAAAGTCTGATGGAGTGGAGTTCACTGTCAGTGAGGGTCATTATTGCCCTGCATTCTCAAAGGCTGTTAAAGCCATGAAGAAGGGAGAGAAAGTGATTTTGTTAGTAAAGCCTCAATATGGATTTGGTGAGAAGGGGAAGCCAGCGCATGGTGATGAAGGTGCAGTTCCACCAAATGCATCACTGCAGATTACACTTGAGTTGGTTTCTTGGAAGACTGTTTCAGATGTGACTAGTGACAAGAAAGTCATAAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCGTCCAAATGAAGGAGCCATCGTAAAATTGAAACTAATTGGTAAACTGCAAGATGGTACTGTCTTTTTTGAAAAGGGCCATGATGAAGAAGAGAAGCTGTTTGAATTCAAAACAGATGAGGAACAAGTCATTGATGGGCTTGATAAAGCTGTATTGACTATGAAGAAGGGTGAGGTAGCATTATTGATTATTGCTCCCGAGTATGCATTTGATTCATCACAGTCCCAGCAGGAGTTGGCTGTTCCTCCTAATTCAACCGTGTATTATGAAGTTGAGCTAGTGTCATATGAGAAGGAGAAGGAGTCTTGGGATATGAATACTCAGGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGTTTTGTTTAAAGCCGGTAAATATGAAAGAGCTTCCAAAAGATATGACAAGGCTGCGAAGTACATAGAGTATGATTCCTCCTTCAGCGAGGAAGAGAAAAAGCTGTCGAAGACCTTGAAGATTGCCTCTTATCTTAACAACGCTGCTTGCAAGTTGAAGTTGAAAGAGTACAAAGATGCAGAGAAATTGTGTACTAAGGTGTTGGACATTGAGAGCACAAATGTTAAAGCCCTCTATAGAAGGGCCCAAGCAAGTATGCAGTTAACTGACTTGGATTTGGCCGAAATTGACATCAAAAAAGCTCTTGAGGTTGACCCTGACAACAGGGAAGTAAAGCTGGAGTACAAGAATTTGAAGCAAATGGTAAAGGAGTACAATAATAAGCAGGCAAAATTCTATGGAAATATGTTCGGCTTGAGAAAGGCTTGA 1635 0.4202 MNDDFEIPQAEEMNEDFDLPEEKVGDEREVGDRGLKKKLLKLGEGWDTPESGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQGQVIQGWDEGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVEMLSWTSVKDICKDGGIFKRILKEGEKWENPKDPDEVLVNYEVRLEDGKAVAKSDGVEFTVSEGHYCPAFSKAVKAMKKGEKVILLVKPQYGFGEKGKPAHGDEGAVPPNASLQITLELVSWKTVSDVTSDKKVIKKILKEGEGYERPNEGAIVKLKLIGKLQDGTVFFEKGHDEEEKLFEFKTDEEQVIDGLDKAVLTMKKGEVALLIIAPEYAFDSSQSQQELAVPPNSTVYYEVELVSYEKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYDKAAKYIEYDSSFSEEEKKLSKTLKIASYLNNAACKLKLKEYKDAEKLCTKVLDIESTNVKALYRRAQASMQLTDLDLAEIDIKKALEVDPDNREVKLEYKNLKQMVKEYNNKQAKFYGNMFGLRKA* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1194 544 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 137 IPR001179 GO:0003755
Mtr7g1194 544 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 163 253 IPR001179 GO:0003755
Mtr7g1194 544 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 279 374 IPR001179 GO:0003755
Mtr7g1194 544 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 168 257 IPR001179 GO:0003755
Mtr7g1194 544 PANTHER PEPTIDYLPROLYL ISOMERASE 1 263 - -
Mtr7g1194 544 PANTHER PEPTIDYLPROLYL ISOMERASE 266 376 - -
Mtr7g1194 544 PANTHER PEPTIDYLPROLYL ISOMERASE 377 541 - -
Mtr7g1194 544 MobiDBLite consensus disorder prediction 1 30 - -
Mtr7g1194 544 SMART tpr_5 443 476 IPR019734 GO:0005515
Mtr7g1194 544 SMART tpr_5 477 510 IPR019734 GO:0005515
Mtr7g1194 544 SMART tpr_5 394 427 IPR019734 GO:0005515
Mtr7g1194 544 MobiDBLite consensus disorder prediction 1 20 - -
Mtr7g1194 544 SUPERFAMILY FKBP-like 259 394 - -
Mtr7g1194 544 Gene3D Tetratricopeptide repeat domain 380 537 IPR011990 GO:0005515
Mtr7g1194 544 SUPERFAMILY FKBP-like 144 260 - -
Mtr7g1194 544 SUPERFAMILY TPR-like 382 538 IPR011990 GO:0005515
Mtr7g1194 544 ProSiteProfiles TPR repeat profile. 477 510 IPR019734 GO:0005515
Mtr7g1194 544 Gene3D - 143 257 IPR046357 GO:0003755
Mtr7g1194 544 Gene3D - 26 142 IPR046357 GO:0003755
Mtr7g1194 544 SUPERFAMILY FKBP-like 19 151 - -
Mtr7g1194 544 Coils Coil 510 530 - -
Mtr7g1194 544 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 377 541 - -
Mtr7g1194 544 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 266 376 - -
Mtr7g1194 544 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 263 - -
Mtr7g1194 544 Gene3D - 258 378 IPR046357 GO:0003755
Mtr7g1194 544 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 140 IPR001179 GO:0003755
Mtr7g1194 544 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 377 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1194 Mtr-Chr7 25293715 25300519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1194 23 540 Calmodulin-binding Proteins AT3G25230 77.264 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1194 K09571 - gmx:100812632 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1194 7 25293715 25300519 Mtr8g0312 8 3430480 3435061 PCT